RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ACKR4Q9NPB9 350 aa8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 MOCS1Q9NZB8 636 aa8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 NOP53Q9NZM5 478 aaKnown RBP8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 BAIAP2L1Q9UHR4 511 aa8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 CNOT11Q9UKZ1 510 aaKnown RBP8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 MRPS33Q9Y291 106 aaKnown RBP8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 HIVEP2P31629 2446 aa8.44□□□□□ -1.06
CHMP4A-205ENST00000531158 NCF1BA6NI72 391 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 WASHC1A8K0Z3 465 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 HSPB2A8KAH6 182 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 NCF1CA8MVU1 366 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 GOLGA8RI6L899 631 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 GLRA3O75311 464 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PRKRAO75569 313 aaKnown RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PIAS1O75925 651 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 SCELO95171 688 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 EPPINO95925 133 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PYGBP11216 843 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 NCF1P14598 390 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 GABRA1P14867 456 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 CD53P19397 219 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 ATP5A1P25705 553 aaKnown RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 GMPRP36959 345 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 HNMTP50135 292 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 AGFG1P52594 562 aaKnown RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 ARFIP2P53365 341 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 STX4Q12846 297 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 DUSP8Q13202 625 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 DOC2AQ14183 400 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 E2F2Q14209 437 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 TGFBIQ15582 683 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 HSPB2Q16082 182 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 BICRALQ6AI39 1079 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 TRIM40Q6P9F5 258 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 CHSY3Q70JA7 882 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 ZC3HC1Q86WB0 502 aaKnown RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 CXorf67Q86X51 503 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 CIARTQ8N365 385 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 FBXW8Q8N3Y1 598 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 RNF175Q8N4F7 328 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 SPATA6LQ8N4H0 392 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 ACOT4Q8N9L9 421 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 LINC01560Q8TB33 94 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 NUBPLQ8TB37 319 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 ISL2Q96A47 359 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PPWD1Q96BP3 646 aaKnown RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 SPACA9Q96E40 222 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 SENP5Q96HI0 755 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 EGFL8Q99944 293 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 MS4A8Q9BY19 250 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PRDM14Q9GZV8 571 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 UBQLN3Q9H347 655 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 MMADHCQ9H3L0 296 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 LYRM4Q9HD34 91 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 ZFP64Q9NPA5 681 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 SMYD2Q9NRG4 433 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 JKAMPQ9P055 326 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 CORO1CQ9ULV4 474 aaPredicted RBP8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PLLPQ9Y342 182 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 PCDHGB3Q9Y5G1 929 aa8.43□□□□□ -1.06
CHMP4A-205ENST00000531158 CR1P17927 2039 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 FAM95CA0A1B0GW59 222 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 A0A1W2PS29 197 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 PABPN1LA6NDY0 278 aaKnown RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 CXorf49A8MYA2 514 aaPredicted RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 SAP18O00422 153 aaKnown RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 DVL2O14641 736 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 SH3BGRLO75368 114 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 TRIM3O75382 744 aaPredicted RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 LY6G6DO95868 133 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 HRGP04196 525 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 TNNI3P19429 210 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 CALB2P22676 271 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 GSTM2P28161 218 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 GGT5P36269 586 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 STT3AP46977 705 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 OCRLQ01968 901 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 SF3A3Q12874 501 aaKnown RBP eCLIP8.42□□□□□ -1.069e-7■■■■□ 24.7
CHMP4A-205ENST00000531158 POU4F3Q15319 338 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 SLC22A10Q63ZE4 541 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 PLXDC2Q6UX71 529 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 TMEM64Q6YI46 380 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 PHC2Q8IXK0 858 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 ZNF441Q8N8Z8 693 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 TTLQ8NG68 377 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 OR5L2Q8NGL0 311 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 GOT1L1Q8NHS2 421 aaPredicted RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 UCN3Q969E3 161 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 SLC7A6OSQ96CW6 309 aaPredicted RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 NTNG2Q96CW9 530 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 TIMP4Q99727 224 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 TMEM120AQ9BXJ8 343 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 EHD1Q9H4M9 534 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 EXO5Q9H790 373 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 MCM8Q9UJA3 840 aa8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 CHD3Q12873 2000 aaKnown RBP8.42□□□□□ -1.06
CHMP4A-205ENST00000531158 C15orf38-AP3S2A0A0A6YYH1 394 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 MBD3L4A6NDZ8 208 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms