RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 ASIC5Q9NY37 505 aa10.98□□□□□ -0.65
LTBP3-219ENST00000530990 NOP53Q9NZM5 478 aaKnown RBP10.98□□□□□ -0.65
LTBP3-219ENST00000530990 ERVK-11Q9UQG0 969 aa10.98□□□□□ -0.65
LTBP3-219ENST00000530990 PCDHGB6Q9Y5F9 930 aa10.98□□□□□ -0.65
LTBP3-219ENST00000530990 COPG1Q9Y678 874 aaKnown RBP10.98□□□□□ -0.65
LTBP3-219ENST00000530990 HDAC3O15379 428 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 NME6O75414 186 aaPredicted RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 RASAL1O95294 804 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 MPIP34949 423 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 MC3RP41968 323 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 UQCRFS1P47985 274 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 EMDP50402 254 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 NR0B1P51843 470 aaKnown RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 DIO3P55073 304 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 EMX2Q04743 252 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 SRSF11Q05519 484 aaKnown RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 HSPB3Q12988 150 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 MAD2L1Q13257 205 aaPredicted RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 MAPKAPK3Q16644 382 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 SMU1Q2TAY7 513 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 FHL5Q5TD97 284 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 HLA-DQA1Q5Y7H0 255 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 OPN5Q6U736 354 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 TMEM107Q6UX40 140 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 ZNF551Q7Z340 670 aaPredicted RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 MAVSQ7Z434 540 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 WDR75Q8IWA0 830 aaKnown RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 GPALPP1Q8IXQ4 340 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 KRTCAP2Q8N6L1 136 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 PSD4Q8NDX1 1056 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 OR7A2PQ8NGA2 310 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 LRRC8CQ8TDW0 803 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 NUDT8Q8WV74 236 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 DYDC1Q8WWB3 177 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 TP53INP1Q96A56 240 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 TMEM125Q96AQ2 219 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 MTERF3Q96E29 417 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 BARD1Q99728 777 aaKnown RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 SLCO1B3Q9NPD5 702 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 INTS9Q9NV88 658 aaKnown RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 SH3BP4Q9P0V3 963 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 ATP6V1HQ9UI12 483 aa10.97□□□□□ -0.65
LTBP3-219ENST00000530990 EIF3LQ9Y262 564 aaKnown RBP10.97□□□□□ -0.65
LTBP3-219ENST00000530990 NCKAP5O14513 1909 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 GOLGA8QA0A0J9YX86 632 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 GOLGA8OA6NCC3 632 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 TRPC5OSA6NMA1 111 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 GOLGA8NF8WBI6 632 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 PLOD3O60568 738 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 VPS4BO75351 444 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 FBXO45P0C2W1 286 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 LBPP18428 481 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 EFNA1P20827 205 aaPredicted RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 EPHA3P29320 983 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 FRKP42685 505 aaPredicted RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 GPR85P60893 370 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 KCNC4Q03721 635 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 ZNF791Q3KP31 576 aaPredicted RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 OGFOD2Q6N063 350 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 TMEM64Q6YI46 380 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 RTL4Q6ZR62 310 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 LARP4Q71RC2 724 aaKnown RBP eCLIP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 R3HCC1LQ7Z5L2 792 aaKnown RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 LRRC34Q8IZ02 419 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 PRR22Q8IZ63 422 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 SLC15A4Q8N697 577 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 BCORP1Q8N888 145 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 C17orf47Q8NEP4 570 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 ZFP28Q8NHY6 868 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 PIWIL2Q8TC59 973 aaKnown RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 FAR1Q8WVX9 515 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 ZBED6CLQ96FA7 236 aaPredicted RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 C7orf26Q96N11 449 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 FRMD6Q96NE9 622 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 NXF5Q9H1B4 397 aaKnown RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 CLMPQ9H6B4 373 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 WDR55Q9H6Y2 383 aaPredicted RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 TIMMDC1Q9NPL8 285 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 AGPAT4Q9NRZ5 378 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 DEPPQ9NTK1 212 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 OLAHQ9NV23 265 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 PRODH2Q9UF12 536 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 CFL2Q9Y281 166 aa10.96□□□□□ -0.65
LTBP3-219ENST00000530990 KLF13Q9Y2Y9 288 aaPredicted RBP10.96□□□□□ -0.65
LTBP3-219ENST00000530990 SVILO95425 2214 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 A0A087WV62 115 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 ASPDHA6ND91 283 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 TCP11X1B4DZS4 312 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 SLCO1B7G3V0H7 640 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 G3V3Y1 287 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 UPK1AO00322 258 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 PLOD2O00469 737 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 ZNF195O14628 629 aa10.95□□□□□ -0.66
LTBP3-219ENST00000530990 COQ9O75208 318 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms