RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZNF660Q6AZW8 331 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 MRNIPQ6NTE8 343 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ALKAL2Q6UX46 152 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 GSG1LQ6UXU4 331 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 MOB3CQ70IA8 216 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 IKBIPQ70UQ0 350 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 HIST3H2AQ7L7L0 130 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SLC9B2Q86UD5 537 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 KRTCAP2Q8N6L1 136 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 GPR156Q8NFN8 814 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 RPLP0P6Q8NHW5 317 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 HIST1H2ACQ93077 130 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 CPNE4Q96A23 557 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 FAM167AQ96KS9 214 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 DUSP16Q9BY84 665 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TWSG1Q9GZX9 223 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ENKD1Q9H0I2 346 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TCF7L1Q9HCS4 588 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SLC6A20Q9NP91 592 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 NANSQ9NR45 359 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ZFP57Q9NU63 452 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TREM2Q9NZC2 230 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 AKAP7Q9P0M2 348 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 RPS6KB2Q9UBS0 482 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 EIF2B4Q9UI10 523 aaKnown RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 C9orf170A2RU37 121 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ARHGEF33A8MVX0 844 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TLR4O00206 839 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 LCMT2O60294 686 aaKnown RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 STX11O75558 287 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 IFNGP01579 166 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TFP02787 698 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 HLA-DQB2P05538 268 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 HOXC4P09017 264 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 NPR2P20594 1047 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 PRPH2P23942 346 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 LMO2P25791 158 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 S100A3P33764 101 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 MECP2P51608 486 aaKnown RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 STC1P52823 247 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 RABGGTBP53611 331 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SELENOWP63302 87 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 MLLT1Q03111 559 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SOX4Q06945 474 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TMEM132DQ14C87 1099 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 EXOC3L2Q2M3D2 409 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SPDYE7PQ495Y7 208 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ZNF770Q6IQ21 691 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 FAM196AQ6ZSG2 479 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TSPAN33Q86UF1 283 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SYT14Q8NB59 555 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 PIH1D2Q8WWB5 315 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 CRB3Q9BUF7 120 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SLC25A51Q9H1U9 297 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 FGF20Q9NP95 211 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-214ENST00000530886 SLC22A11Q9NSA0 550 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ZSCAN32Q9NX65 697 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 TAS2R13Q9NYV9 303 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 ACSL6Q9UKU0 697 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 CRYL1Q9Y2S2 319 aa7.71□□□□□ -1.18
CSDE1-214ENST00000530886 MEX3AA1L020 520 aaKnown RBP7.7□□□□□ -1.18
CSDE1-214ENST00000530886 M0R129 80 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 LDB2O43679 373 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 LILRB5O75023 590 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 KDM4BO94953 1096 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 CRYBA1P05813 215 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 SYPP08247 313 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 PRPS2P11908 318 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 PCGF2P35227 344 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 NDUFV1P49821 464 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 CTSCP53634 463 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 GAS1P54826 345 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 WNT3AP56704 352 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 CRTC2Q53ET0 693 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-214ENST00000530886 SFRP5Q5T4F7 317 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 PAQR3Q6TCH7 311 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 GOLGA7Q7Z5G4 137 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 SERINC5Q86VE9 423 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 PUSL1Q8N0Z8 303 aaKnown RBP7.7□□□□□ -1.18
CSDE1-214ENST00000530886 OXR1Q8N573 874 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 ZNF485Q8NCK3 441 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 DBF4BQ8NFT6 615 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 ASB13Q8WXK3 278 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 NELL1Q92832 810 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 TCF25Q9BQ70 676 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 UTP23Q9BRU9 249 aaKnown RBP7.7□□□□□ -1.18
CSDE1-214ENST00000530886 COLEC11Q9BWP8 271 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 CACNG6Q9BXT2 260 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 QRSL1Q9H0R6 528 aaKnown RBP7.7□□□□□ -1.18
CSDE1-214ENST00000530886 PIGMQ9H3S5 423 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 OPA3Q9H6K4 179 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 RBM22Q9NW64 420 aaKnown RBP eCLIP7.7□□□□□ -1.187e-6■■■■□ 24.6
CSDE1-214ENST00000530886 RASL12Q9NYN1 266 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 ZNF70Q9UC06 446 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-214ENST00000530886 CLCA2Q9UQC9 943 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 PLXNB3Q9ULL4 1909 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 NPEPPSL1A6NEC2 478 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 GFYI3L273 518 aa7.7□□□□□ -1.18
CSDE1-214ENST00000530886 GSTZ1O43708 216 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms