RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TMEM80Q96HE8 168 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 DOHHQ9BU89 302 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 SLC22A4Q9H015 551 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 PELI2Q9HAT8 420 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 CD93Q9NPY3 652 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 SLAMF7Q9NQ25 335 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 KRT84Q9NSB2 600 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 ERVK13-1Q9NX77 482 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 SIRT5Q9NXA8 310 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TEKT2Q9UIF3 430 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 RAB23Q9ULC3 237 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 NDRG4Q9ULP0 352 aaKnown RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 HCN4Q9Y3Q4 1203 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 CCDC182A6NF36 153 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 WASHC1A8K0Z3 465 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 KLF8O95600 359 aaPredicted RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 ERGP11308 486 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 HOXB3P14651 431 aaPredicted RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 HOXB2P14652 356 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 HLA-DMAP28067 261 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 NTSR1P30989 418 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 UQCRC1P31930 480 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 BSGP35613 385 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 GZMKP49863 264 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 MANFP55145 182 aaKnown RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 SRP54P61011 504 aaKnown RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 PPP2CBP62714 309 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 PPP2CAP67775 309 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 CDK6Q00534 326 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 ENPP2Q13822 863 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 SDE2Q6IQ49 451 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TRIM40Q6P9F5 258 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 WASH2PQ6VEQ5 465 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 AHSA2Q719I0 299 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 RAB42Q8N4Z0 105 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TM4SF18Q96CE8 201 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 C7orf34Q96L11 122 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 RHNO1Q9BSD3 238 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 C1QTNF2Q9BXJ5 285 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 DNMT3AQ9Y6K1 912 aaPredicted RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 SPTBN5Q9NRC6 3674 aaKnown RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 OR6C70A6NIJ9 312 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TMEM229AB2RXF0 380 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 NDUFS4O43181 175 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TMPRSS11DO60235 418 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 PEX14O75381 377 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 EGFP01133 1207 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 PSKH1P11801 424 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 ITGA1P56199 1179 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 CSNK1G2P78368 415 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 REEP5Q00765 189 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TEAD4Q15561 434 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 SPDYE7PQ495Y7 208 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 HDDC2Q7Z4H3 204 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TTC29Q8NA56 475 aaPredicted RBP10.93□□□□□ -0.66
USP35-207ENST00000530546 GOT1L1Q8NHS2 421 aaPredicted RBP10.93□□□□□ -0.66
USP35-207ENST00000530546 LHFPL5Q8TAF8 219 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 SPATA9Q9BWV2 254 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 NLNQ9BYT8 704 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 UCK2Q9BZX2 261 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 RHBGQ9H310 441 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 WASH6PQ9NQA3 447 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 C1GALT1Q9NS00 363 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TEX10Q9NXF1 929 aaPredicted RBP10.93□□□□□ -0.66
USP35-207ENST00000530546 GLTPQ9NZD2 209 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TNFRSF10DQ9UBN6 386 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 NUFIP1Q9UHK0 495 aaKnown RBP10.93□□□□□ -0.66
USP35-207ENST00000530546 SNX7Q9UNH6 387 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 GLOD5A6NK44 160 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 C1QBP02746 253 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 ACADMP11310 421 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 HSD17B2P37059 387 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 ADPRHP54922 357 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 SELENOWP63302 87 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 OLR1P78380 273 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 POU6F2P78424 691 aaPredicted RBP10.93□□□□□ -0.66
USP35-207ENST00000530546 LRRC74AQ0VAA2 488 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 RDH10Q8IZV5 341 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 OR52E1Q8NGJ3 308 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 RAB8BQ92930 207 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 UBE2FQ969M7 185 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 TRNT1Q96Q11 434 aaKnown RBP10.93□□□□□ -0.66
USP35-207ENST00000530546 APOOQ9BUR5 198 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 BTBD1Q9H0C5 482 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 FGF22Q9HCT0 170 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 RASSF1Q9NS23 344 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 CLEC1BQ9P126 229 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP35-207ENST00000530546 KLK4Q9Y5K2 254 aa10.93□□□□□ -0.66
USP35-207ENST00000530546 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 POM121BA6NF01 834 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 J3KTA2 159 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 MEN1O00255 615 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 PRKRAO75569 313 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 C9P02748 559 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 PDGFAP04085 211 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 DDCP20711 480 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 SSR2P43308 183 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 RAB28P51157 221 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms