RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PRKCEQ02156 737 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 FASTKQ14296 549 aaKnown RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF699Q32M78 642 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 ACSF3Q4G176 576 aaPredicted RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 HSP90AA5PQ58FG0 334 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 LDLRAP1Q5SW96 308 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 DOK6Q6PKX4 331 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 DPY19L2P2Q6ZN68 376 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 GOLGA7Q7Z5G4 137 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 LRRTM1Q86UE6 522 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 KCNMB4Q86W47 210 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 MLKLQ8NB16 471 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 ZNRF1Q8ND25 227 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 DENND6BQ8NEG7 585 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 IPMKQ8NFU5 416 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 FBXO25Q8TCJ0 367 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 SSC4DQ8WTU2 575 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 FCGR1BQ92637 280 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 VPS39Q96JC1 886 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 PRICKLE1Q96MT3 831 aaPredicted RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 RCHY1Q96PM5 261 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 TNFRSF13CQ96RJ3 184 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 UPF3AQ9H1J1 476 aaKnown RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 NT5DC2Q9H857 520 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 ROPN1Q9HAT0 212 aaPredicted RBP3.75□□□□□ -1.81
C11orf88-204ENST00000529661 MGAT4BQ9UQ53 548 aa3.75□□□□□ -1.81
C11orf88-204ENST00000529661 ABCC4O15439 1325 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 COL2A1P02458 1487 aaPredicted RBP3.74□□□□□ -1.81
C11orf88-204ENST00000529661 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 SOCS3O14543 225 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 CHADO15335 359 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 CLDN3O15551 220 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 IDH3BO43837 385 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 NDUFA7O95182 113 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 IFNB1P01574 187 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 IGHG1P01857 330 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 TRIM23P36406 574 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 SLC1A6P48664 564 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 PRELPP51888 382 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 ENPP2Q13822 863 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 MS4A18Q3C1V0 323 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 WDR25Q64LD2 544 aaPredicted RBP3.74□□□□□ -1.81
C11orf88-204ENST00000529661 VPS36Q86VN1 386 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 RANBP3LQ86VV4 465 aaPredicted RBP3.74□□□□□ -1.81
C11orf88-204ENST00000529661 LYG1Q8N1E2 194 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 CERS5Q8N5B7 392 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF781Q8N8C0 355 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 AQP11Q8NBQ7 271 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 ICA1LQ8NDH6 482 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 OR1K1Q8NGR3 316 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 OR1B1Q8NGR6 318 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 FAM222BQ8WU58 562 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 ANKRD27Q96NW4 1050 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 CRACR2AQ9BSW2 395 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 WRAP53Q9BUR4 548 aaKnown RBP3.74□□□□□ -1.81
C11orf88-204ENST00000529661 COQ10BQ9H8M1 238 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 Q9HAA7 133 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 DEPPQ9NTK1 212 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF490Q9ULM2 529 aaPredicted RBP3.74□□□□□ -1.81
C11orf88-204ENST00000529661 KIF3AQ9Y496 699 aa3.74□□□□□ -1.81
C11orf88-204ENST00000529661 A0A087WZY1 265 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 BCLAF3A2AJT9 711 aaKnown RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 TMCO5BA8MYB1 307 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 LGALS8O00214 317 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 PDXKO00764 312 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ZNF749O43361 778 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 CCDC159P0C7I6 412 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ADORA3P0DMS8 318 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 RRASP10301 218 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 FOSL2P15408 326 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 CYP11B1P15538 503 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 CD1DP15813 335 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 PRPHP41219 470 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ACAA2P42765 397 aaKnown RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 MTTPP55157 894 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 PEX3P56589 373 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 DSCR10P59022 87 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 HMGN5P82970 282 aaKnown RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ZKSCAN8Q15776 578 aaPredicted RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ECSCRQ19T08 205 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ADPRMQ3LIE5 342 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 POM121L1PQ3SYA9 428 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 TCHHL1Q5QJ38 904 aaPredicted RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 ARSKQ6UWY0 536 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 PAQR9Q6ZVX9 377 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 TMEM110Q86TL2 294 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 CCDC71Q8IV32 467 aaPredicted RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 Q8NBF4 154 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 GMCL1P1Q8NEA9 526 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 WDR36Q8NI36 951 aaKnown RBP3.73□□□□□ -1.81
C11orf88-204ENST00000529661 CPXM1Q96SM3 734 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 FICDQ9BVA6 458 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 TEX13BQ9BXU2 312 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 DPH5Q9H2P9 285 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 VAT1LQ9HCJ6 419 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 YAE1D1Q9NRH1 226 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 SLC35D1Q9NTN3 355 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 P2RX2Q9UBL9 471 aa3.73□□□□□ -1.81
C11orf88-204ENST00000529661 RARRES3Q9UL19 164 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms