RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PDSS1Q5T2R2 415 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 SLCO6A1Q86UG4 719 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 RETREG3Q86VR2 466 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 TCEANCQ8N8B7 351 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 PROKR2Q8NFJ6 384 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 MAP3K3Q99759 626 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 OR52A5Q9H2C5 316 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 TUBB1Q9H4B7 451 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 ARMC1Q9NVT9 282 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 WNT16Q9UBV4 365 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 SLC23A2Q9UGH3 650 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 DKKL1Q9UK85 242 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.25□□□□□ -0.13
USP47-207ENST00000527733 TRIP11Q15643 1979 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 TMEM265A0A087WTH1 108 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 TLCD2A6NGC4 264 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 CEACAM5P06731 702 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 PCYT1AP49585 367 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 MVKQ03426 396 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 FAM83HQ6ZRV2 1179 aaPredicted RBP14.25□□□□□ -0.13
USP47-207ENST00000527733 ARL14Q8N4G2 192 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 PPP4R1LQ9P1A2 415 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 NPIPA5E9PKD4 350 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 MAGEB3O15480 346 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 MOSPD3O75425 235 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 FESP07332 822 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 CPMP14384 443 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 RPTNQ6XPR3 784 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 S100ZQ8WXG8 99 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 ZNF624Q9P2J8 865 aaPredicted RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 NPIPA1Q9UND3 350 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 KIF13BQ9NQT8 1826 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 FBP2O00757 339 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 NARSO43776 548 aaKnown RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 KLK8O60259 260 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 OXSR1O95747 527 aaPredicted RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 CLIC3O95833 236 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 PTNP21246 168 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 OTX2P32243 289 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 HSD11B2P80365 405 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 MEP1AQ16819 746 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 ALKBH2Q6NS38 261 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 SLC27A4Q6P1M0 643 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 ENKURQ8TC29 256 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 SFXN5Q8TD22 340 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 UFD1Q92890 307 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 NT5DC2Q9H857 520 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 DCAF13Q9NV06 445 aaKnown RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 LDOC1O95751 146 aaPredicted RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 RNF144AP50876 292 aaPredicted RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 EIF4EBP2Q13542 120 aaPredicted RBP14.24□□□□□ -0.13
USP47-207ENST00000527733 ATP1A4Q13733 1029 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 SLC5A12Q1EHB4 618 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 KLHL36Q8N4N3 616 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 RSPRY1Q96DX4 576 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 ERVK-19Q9WJR5 959 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 PCDHA9Q9Y5H5 950 aa14.24□□□□□ -0.13
USP47-207ENST00000527733 OR5K3A6NET4 321 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 SORBS2O94875 1100 aaKnown RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 BMP2P12643 396 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 NR4A1P22736 598 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 OR2AJ1Q8NGZ0 328 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 MUS81Q96NY9 551 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 TBX5Q99593 518 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 SLAMF8Q9P0V8 285 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 C2orf92A0A1B0GVN3 265 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 PLGP00747 810 aaPredicted RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 B4GALNT1Q00973 533 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 NDUFAF6Q330K2 333 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 LRIT3Q3SXY7 679 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 ZNF595Q8IYB9 648 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 TSEN15Q8WW01 171 aaKnown RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 STMN3Q9NZ72 180 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 SBF1O95248 1867 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 H0YJX3 145 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 TSPAN12O95859 305 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 NR0B1P51843 470 aaKnown RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 CDH15P55291 814 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 TIGD6Q17RP2 521 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 XKR7Q5GH72 579 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 RPS26P11Q5JNZ5 115 aaPredicted RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 FAM69BQ5VUD6 431 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 ZNF433Q8N7K0 673 aaPredicted RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 OR5D16Q8NGK9 328 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 RAB2BQ8WUD1 216 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 GORASP2Q9H8Y8 452 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 FGF21Q9NSA1 209 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 MTCH2Q9Y6C9 303 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 WWP2O00308 870 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 SOX1O00570 391 aaPredicted RBP14.23□□□□□ -0.13
USP47-207ENST00000527733 BRINP1O60477 761 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 HK1P19367 917 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 PTGER1P34995 402 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 OR1D4P47884 311 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 KNTC1P50748 2209 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 ITGADQ13349 1161 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 CLCA4Q14CN2 919 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 SLC35F1Q5T1Q4 408 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 ABHD17CQ6PCB6 329 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms