RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SIKE1Q9BRV8 207 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 BHLHE41Q9C0J9 482 aaPredicted RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 WWTR1Q9GZV5 400 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 NPHS2Q9NP85 383 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 FGFR1OP2Q9NVK5 253 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 ABI3Q9P2A4 366 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 BCAP29Q9UHQ4 241 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 YARS2Q9Y2Z4 477 aaKnown RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 KALRNO60229 2985 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 A0A087WV62 115 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 DYTNA2CJ06 578 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 WWP2O00308 870 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 FCHO1O14526 889 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ITGA10O75578 1167 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 OR2J2O76002 312 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 IFI6P09912 130 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 TRHRP34981 398 aaPredicted RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 EMDP50402 254 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 CLNS1AP54105 237 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 MANFP55145 182 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 NME5P56597 212 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 UFM1P61960 85 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ARG2P78540 354 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 KLRB1Q12918 225 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 HSPB3Q12988 150 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 MLC1Q15049 377 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 EBPQ15125 230 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 RPS6KA2Q15349 733 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 PGS1Q32NB8 556 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 PDCD4Q53EL6 469 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 PIGGQ5H8A4 983 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 Q6ZS92 163 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 PTRH1Q86Y79 214 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF441Q8N8Z8 693 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 TEX19Q8NA77 164 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 CATSPER1Q8NEC5 780 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 OR52R1Q8NGF1 315 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 OR8J2Q8NGG1 315 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 C16orf52Q8NHV5 167 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ADIPOR1Q96A54 375 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ELP4Q96EB1 424 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 THOC1Q96FV9 657 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 MARK4Q96L34 752 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 TEX37Q96LM6 180 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ELAC2Q9BQ52 826 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 DUSP26Q9BV47 211 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 CLMPQ9H6B4 373 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 ANKRA2Q9H9E1 313 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 SDR39U1Q9NRG7 319 aaPredicted RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 DCTN4Q9UJW0 460 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 CFL2Q9Y281 166 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 CSAG2Q9Y5P2 127 aa11.98□□□□□ -0.49
SMPD1-202ENST00000526280 SMG1Q96Q15 3661 aaKnown RBP11.98□□□□□ -0.49
SMPD1-202ENST00000526280 NUP214P35658 2090 aaPredicted RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 C2orf92A0A1B0GVN3 265 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 A0A1W2PRB8 838 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 OR5H15A6NDH6 313 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 E9PBE3 544 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 UPK1AO00322 258 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 PRAMEF2O60811 474 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 F10P00742 488 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 EFNA1P20827 205 aaPredicted RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 IL12AP29459 219 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 CD96P40200 585 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 MC3RP41968 323 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 MRPL19P49406 292 aaKnown RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 ST13P50502 369 aaKnown RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 TNFSF10P50591 281 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 SSR4P51571 173 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 WNT3P56703 355 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 SRSF11Q05519 484 aaKnown RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 NFATC3Q12968 1075 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 TUBA3CQ13748 450 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 DPY19L1Q2PZI1 675 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 NADK2Q4G0N4 442 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF468Q5VIY5 522 aaPredicted RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 TUBA3EQ6PEY2 450 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 TMEM107Q6UX40 140 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 OR2L13Q8N349 312 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 C17orf47Q8NEP4 570 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 OR5P2Q8WZ92 322 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 TP53INP1Q96A56 240 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 GAL3ST4Q96RP7 486 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 RASL10BQ96S79 203 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 UTP23Q9BRU9 249 aaKnown RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 TRIM45Q9H8W5 580 aaPredicted RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 PRODH2Q9UF12 536 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 C19orf53Q9UNZ5 99 aaPredicted RBP11.97□□□□□ -0.49
SMPD1-202ENST00000526280 B3GNT3Q9Y2A9 372 aa11.97□□□□□ -0.49
SMPD1-202ENST00000526280 RNASET2O00584 256 aaKnown RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF354AO60765 605 aaPredicted RBP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 SCN2BO60939 215 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 SLC22A3O75751 556 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 C1QL1O75973 258 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 PSMG1O95456 288 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 TROVE2P10155 538 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMPD1-202ENST00000526280 GPX3P22352 226 aa11.96□□□□□ -0.49
SMPD1-202ENST00000526280 GPC1P35052 558 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms