RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 ATAD1Q8NBU5 361 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 GMCL1P1Q8NEA9 526 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 CCDC112Q8NEF3 446 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 LPCAT1Q8NF37 534 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 OR9A1PQ8NGU1 263 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ZNF461Q8TAF7 563 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ZNF671Q8TAW3 534 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TEX47Q8TBZ9 253 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 DYDC1Q8WWB3 177 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 SLC5A11Q8WWX8 675 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ERO1AQ96HE7 468 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 C7orf34Q96L11 122 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 CEP19Q96LK0 163 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TSNARE1Q96NA8 513 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 OPALINQ96PE5 141 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 DHRS9Q9BPW9 319 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 MLPHQ9BV36 600 aaPredicted RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 SDCBP2Q9H190 292 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TUBB1Q9H4B7 451 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 THAP9Q9H5L6 903 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 DMAP1Q9NPF5 467 aaPredicted RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.17□□□□□ -1.9
CD44-217ENST00000525348 EURLQ9NYK6 297 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TRIM10Q9UDY6 481 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 BAIAP2L1Q9UHR4 511 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 RARRES3Q9UL19 164 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TP53TG3Q9ULZ0 132 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 CBY1Q9Y3M2 126 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 MYOM3Q5VTT5 1437 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 MIA2Q96PC5 1412 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 NEDD4P46934 1319 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 KIF24Q5T7B8 1368 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ANKRD30AQ9BXX3 1397 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ZMYM4Q5VZL5 1548 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 UGGT2Q9NYU1 1516 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 A0A0J9YVX5 310 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 NCF1BA6NI72 391 aaPredicted RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 NCF1CA8MVU1 366 aaPredicted RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 H0YIV9 168 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 NDUFS8O00217 210 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 CLDN3O15551 220 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 RRP8O43159 456 aaKnown RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 ZSCAN12O43309 604 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 STX10O60499 249 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 CYTIPO60759 359 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 FMO6PO60774 539 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 PFDN1O60925 122 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ATP9AO75110 1047 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 SMIM24O75264 130 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 SEC22BO75396 215 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 SAP30O75446 220 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 CRYZL1O95825 349 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 IFNA14P01570 189 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 HMGN1P05114 100 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 FYNP06241 537 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 APOA4P06727 396 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 MYBL1P10243 752 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ICAM2P13598 275 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 TCF4P15884 667 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 EIF2S2P20042 333 aaKnown RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 AZU1P20160 251 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 AADACP22760 399 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 MAPK3P27361 379 aaPredicted RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 HMOX2P30519 316 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 OXTRP30559 389 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 CAPGP40121 348 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 GDI2P50395 445 aaKnown RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 MTCP1P56278 107 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 MAP3K7CLP57077 242 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 NLRP11P59045 1033 aaKnown RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 ACTR1AP61163 376 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 HAND2P61296 217 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 DUSP5Q16690 384 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 KYNUQ16719 465 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ZNF674Q2M3X9 581 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 PARP6Q2NL67 630 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 LBHQ53QV2 105 aaPredicted RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 C6orf183Q5T699 404 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 DUPD1Q68J44 220 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 SLC30A6Q6NXT4 461 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ZCCHC12Q6PEW1 402 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ZNF841Q6ZN19 808 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 Q6ZR54 194 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 TIPARPQ7Z3E1 657 aaKnown RBP3.16□□□□□ -1.9
CD44-217ENST00000525348 C5orf24Q7Z6I8 188 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 GLRX5Q86SX6 157 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ZNF677Q86XU0 584 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 FAM219AQ8IW50 185 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 CCDC36Q8IYA8 594 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 NUP93Q8N1F7 819 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ANKFN1Q8N957 763 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 DENND6BQ8NEG7 585 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 OR6J1Q8NGC5 347 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 OR10G7Q8NGN6 311 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 ANGPTL6Q8NI99 470 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 FANK1Q8TC84 345 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 GANCQ8TET4 914 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 GRK7Q8WTQ7 553 aa3.16□□□□□ -1.9
CD44-217ENST00000525348 NPRL2Q8WTW4 380 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms