RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 PKMYT1Q99640 499 aa3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 TRIM51Q9BSJ1 452 aa3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 NACA2Q9H009 215 aa3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 RNF41Q9H4P4 317 aaPredicted RBP3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 RBM28Q9NW13 759 aaKnown RBP3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 COQ3Q9NZJ6 369 aa3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 RCC2Q9P258 522 aaKnown RBP3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 ORC3Q9UBD5 711 aaPredicted RBP3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 SUN2Q9UH99 717 aa3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 LNPEPQ9UIQ6 1025 aa3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 EXOGQ9Y2C4 368 aaKnown RBP3.21□□□□□ -1.9
NSMCE2-211ENST00000523549 HMGB1P1B2RPK0 211 aaPredicted RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 POLR1CO15160 346 aaPredicted RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 PLPP2O43688 288 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 DNAJB6O75190 326 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 GPC4O75487 556 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 PSMD10O75832 226 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 IPO7O95373 1038 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 GCNT3O95395 438 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 TBX18O95935 607 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CXCL8P10145 99 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 BDNFP23560 247 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CD1CP29017 333 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 PPARGP37231 505 aaPredicted RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 GARSP41250 739 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 PIK3CAP42336 1068 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 PGFP49763 221 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 NAPAP54920 295 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 MAZP56270 477 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 SLC8A3P57103 927 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CD81P60033 236 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ARF3P61204 181 aaPredicted RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ACTG1P63261 375 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ARF1P84077 181 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CEBPZQ03701 1054 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 RBPJQ06330 500 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 MFAP5Q13361 173 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 TNK1Q13470 666 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 MAMLD1Q13495 774 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CAPRIN1Q14444 709 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 HNRNPA1L2Q32P51 320 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 GTDC1Q4AE62 458 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 TCTEX1D4Q5JR98 221 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 HECTD3Q5T447 861 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 HAUS3Q68CZ6 603 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 KIAA0930Q6ICG6 404 aaPredicted RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CCDC190Q86UF4 302 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 TMEM116Q8NCL8 245 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ELMO2Q96JJ3 720 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 SPATA17Q96L03 361 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 C7orf26Q96N11 449 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 AGAP3Q96P47 875 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 RIT2Q99578 217 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 PELI2Q9HAT8 420 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 LHX9Q9NQ69 397 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 FBXO8Q9NRD0 319 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ABCB8Q9NUT2 735 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 FAM120CQ9NX05 1096 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ARHGEF38Q9NXL2 777 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 AASSQ9UDR5 926 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 CHORDC1Q9UHD1 332 aaPredicted RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 LSM7Q9UK45 103 aaKnown RBP3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 B3GALT5Q9Y2C3 310 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 MYH11P35749 1972 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ANKRD12Q6UB98 2062 aa3.2□□□□□ -1.9
NSMCE2-211ENST00000523549 ITIH6Q6UXX5 1313 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 A0A087WW49 117 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 A0A1W2PPR1 153 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PRR32B1ATL7 298 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 IDSB3KWA1 339 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 C21orf140B9A014 251 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 F8VP50 259 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 SLC7A4O43246 635 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 HCRTR2O43614 444 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 NUDT21O43809 227 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 NDUFS3O75489 264 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 NGFP01138 241 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 FRMD6-AS1P0C7T7 363 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TMEM11P17152 192 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 IDSP22304 550 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PSMA4P25789 261 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 ANXA13P27216 316 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TLX1P31314 330 aaPredicted RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 DEKP35659 375 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 NOP14P78316 857 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PRAMEP78395 509 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 KRT32Q14532 448 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TSTQ16762 297 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 UGP2Q16851 508 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 CTU2Q2VPK5 515 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 CFAP221Q4G0U5 840 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 FILIP1LQ4L180 1135 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PWWP2BQ6NUJ5 590 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TMEM154Q6P9G4 183 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 ZNF534Q76KX8 674 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 HORMAD1Q86X24 394 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 GPALPP1Q8IXQ4 340 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 FAM9BQ8IZU0 186 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 ARIH2OSQ8N7S6 290 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms