RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 GNA13Q14344 377 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TMEM44Q2T9K0 475 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ZDHHC20Q5W0Z9 365 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SFRP4Q6FHJ7 346 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 PODNL1Q6PEZ8 512 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RTL4Q6ZR62 310 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 C6orf120Q7Z4R8 191 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SLC51BQ86UW2 128 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 LINC00471Q8N535 108 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 C2orf69Q8N8R5 385 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ARL14EPQ8N8R7 260 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 OR4F15Q8NGB8 312 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TIFAQ96CG3 184 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CXorf40BQ96DE9 158 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TRMT61AQ96FX7 289 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF582Q96NG8 517 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SAV1Q9H4B6 383 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CDCP1Q9H5V8 836 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 AKAP7Q9P0M2 348 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 C5AR2Q9P296 337 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 LHX3Q9UBR4 397 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ENTPD4Q9Y227 616 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 U3KQ87 197 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 LOC105371267A0A1B0GV96 52 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 POM121CA8CG34 1229 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 LRRN3E7EW58 273 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CFL1P23528 166 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 F8A1P23610 371 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SSR2P43308 183 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 GMFBP60983 142 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 FABP5Q01469 135 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CRTC1Q6UUV9 634 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 MRPL10Q7Z7H8 261 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 WDR48Q8TAF3 677 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SPRYD4Q8WW59 207 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TTC9Q92623 222 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 GPR62Q9BZJ7 368 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 LRRN3Q9H3W5 708 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TRIM36Q9NQ86 728 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 IMP3Q9NV31 184 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 STOX2Q9P2F5 926 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 MGAT4CQ9UBM8 478 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 FTSJ1Q9UET6 329 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 COL4A5P29400 1685 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF638Q14966 1978 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 A0A0A6YYJ9 748 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 A0A1W2PPL8 197 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TEX46H3BTG2 121 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 J3QLW9 94 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RTCAO00442 366 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 TSPAN6O43657 245 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 UGDHO60701 494 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ALDH1A1P00352 501 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF19P17023 458 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 ELAVL4P26378 380 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 EVX1P49640 407 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CRYZQ08257 329 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 KCNC3Q14003 757 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SYT14P1Q58G82 188 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 C3orf38Q5JPI3 329 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SLC30A6Q6NXT4 461 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RFLNAQ6ZTI6 216 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CEACAM19Q7Z692 300 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 DNAJB7Q7Z6W7 309 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RBPMSQ93062 196 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 PTPN18Q99952 460 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RC3H2Q9HBD1 1191 aaKnown RBP8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CAPN10Q9HC96 672 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 OR6C2Q9NZP2 312 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 CNIH4Q9P003 139 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RASD1Q9Y272 281 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 NUBP2Q9Y5Y2 271 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 LRRTM2O43300 516 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 DPM1O60762 260 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 MMP20O60882 483 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 RGS9O75916 674 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ALDOBP05062 364 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ACP2P11117 423 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 CPEP16870 476 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 EPHB3P54753 998 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TAP2Q03519 686 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TNK1Q13470 666 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 EXOSC2Q13868 293 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 MBTPS1Q14703 1052 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 GLYR1Q49A26 553 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 C9orf64Q5T6V5 341 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ALG1LQ6GMV1 187 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 Q6ZVL8 140 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ABI3BPQ7Z7G0 1075 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 METTL3Q86U44 580 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 C17orf64Q86WR6 236 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 RBM45Q8IUH3 476 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 APCDD1Q8J025 514 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TRMT10AQ8TBZ6 339 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 CHTF18Q8WVB6 975 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 FOXJ1Q92949 421 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms