RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 OR9A2Q8NGT5 310 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SHKBP1Q8TBC3 707 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 CA5BP1Q8WTZ4 195 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM174Q8WUU8 243 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MRPS31Q92665 395 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RNFT2Q96EX2 444 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RNF170Q96K19 258 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SAMD8Q96LT4 415 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 FER1L6-AS2Q96M78 137 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MRI1Q9BV20 369 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MAGEB5Q9BZ81 275 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 UCK2Q9BZX2 261 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PCBD2Q9H0N5 130 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PCED1AQ9H1Q7 454 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ATXN3LQ9H3M9 355 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 EFCAB1Q9HAE3 211 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SPATA6Q9NWH7 488 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MS4A12Q9NXJ0 267 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF224Q9NZL3 707 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 IFNKQ9P0W0 207 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SMPXQ9UHP9 88 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ZDHHC8Q9ULC8 765 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MOKQ9UQ07 419 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ADAM18Q9Y3Q7 739 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 NFS1Q9Y697 457 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SPAG17Q6Q759 2223 aa7.15□□□□□ -1.27
HDAC3-216ENST00000523088 ZFHX2Q9C0A1 2572 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 HEPACAM2A8MVW5 462 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 ARHGEF33A8MVX0 844 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 F8WDY8 70 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 SYT5O00445 386 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GIPC1O14908 333 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 KHNYNO15037 678 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 TRIM24O15164 1050 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 SLC16A3O15427 465 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CAPN5O15484 640 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 TGFB1I1O43294 461 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 RGS10O43665 173 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 MOSPD3O75425 235 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 TUSC2O75896 110 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 DCNP07585 359 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CSF1P09603 554 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 OR4Q2P0C623 313 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 METTL15P1P0C7V9 234 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 SP9P0CG40 484 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 RRASP10301 218 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 HAPLN1P10915 354 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CD8BP10966 210 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 IFI30P13284 250 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 PAICSP22234 425 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 ARNTP27540 789 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GTF2E2P29084 291 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 IGFALSP35858 605 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CCR2P41597 374 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 ID4P47928 161 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GIPRP48546 466 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 KHKP50053 298 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 EPHA4P54764 986 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 TMBIM6P55061 237 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CDH15P55291 814 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 MAGOHP61326 146 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 MADCAM1Q13477 382 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 ACOX1Q15067 660 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 P2RY14Q15391 338 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 SNRNP35Q16560 246 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF181Q2M3W8 571 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 RFX4Q33E94 735 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 OTOGLQ3ZCN5 2332 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 C9orf64Q5T6V5 341 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CYB5R2Q6BCY4 276 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GDPD4Q6W3E5 623 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 NAPRTQ6XQN6 538 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 PID1Q7Z2X4 250 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GVINP1Q7Z2Y8 2422 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 FAM71AQ8IYT1 594 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 SCML4Q8N228 414 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 SLC35F6Q8N357 371 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 LRRC18Q8N456 261 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 PLA2G15Q8NCC3 412 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CHDHQ8NE62 594 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 OR5M8Q8NGP6 311 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GPR150Q8NGU9 434 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 OR10T2Q8NGX3 314 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 GPBAR1Q8TDU6 330 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 LRRN4Q8WUT4 740 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 KCNE4Q8WWG9 221 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 FAM3CQ92520 227 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 C12orf43Q96C57 262 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 HAVCR1Q96D42 359 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 MYO19Q96H55 970 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 FCRL2Q96LA5 508 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 MAGEB18Q96M61 343 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CFAP54Q96N23 3096 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CBWD1Q9BRT8 395 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 RPP25Q9BUL9 199 aaKnown RBP7.14□□□□□ -1.27
HDAC3-216ENST00000523088 LRRC3Q9BY71 257 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 FOXQ1Q9C009 403 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
HDAC3-216ENST00000523088 FBXO44Q9H4M3 255 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms