RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 A0A0G2JNJ9 132 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 A8MT66 165 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 GOLGA8RI6L899 631 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 GNB5O14775 395 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 HCN1O60741 890 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 GUCY1B2O75343 617 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 SUPT7LO94864 414 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 CPMP14384 443 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 POU3F2P20265 443 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 TAC1P20366 129 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 CNTFP26441 200 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 GALNSP34059 522 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ADH7P40394 386 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 MAGEA12P43365 314 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 CLCQ05315 142 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 BTKQ06187 659 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 TBL3Q12788 808 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 NTRK2Q16620 822 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 TCHHL1Q5QJ38 904 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 DESI1Q6ICB0 168 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 LETMD1Q6P1Q0 360 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 TMEM200AQ86VY9 491 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 METTL4Q8N3J2 472 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF615Q8N8J6 731 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 CDYL2Q8N8U2 506 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 OR2W6PQ8NHA6 318 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF483Q8TF39 744 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 TM4SF18Q96CE8 201 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 KLHL29Q96CT2 875 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF597Q96LX8 424 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 RILPQ96NA2 401 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF559Q9BR84 538 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF703Q9H7S9 590 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 MCCC2Q9HCC0 563 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF446Q9NWS9 450 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 EHD3Q9NZN3 535 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 TMEM216Q9P0N5 145 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 Q9UFV3 132 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 PSME2Q9UL46 239 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 SLC6A5Q9Y345 797 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 PCDHA9Q9Y5H5 950 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 HIVEP1P15822 2718 aa9.4□□□□□ -0.9
CTNNA1-235ENST00000522730 GOLGA6L10A6NI86 522 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 LRRC3CA6NJW4 275 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 FOXO6A8MYZ6 492 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 MANBAO00462 879 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 WDR1O75083 606 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 SBK3P0C264 359 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 CSNK2A2P19784 350 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 CAPN3P20807 821 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 ENDOUP21128 410 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 UQCRC1P31930 480 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 WNT3P56703 355 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 FUT7Q11130 342 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 DUSP8Q13202 625 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 RPS6KA2Q15349 733 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 SCIMPQ6UWF3 145 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 LRIG3Q6UXM1 1119 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 CDH24Q86UP0 819 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 DMRTC2Q8IXT2 367 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 DND1Q8IYX4 353 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 CLYBLQ8N0X4 340 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 LRRC25Q8N386 305 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 SIMC1Q8NDZ2 872 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 OR7G1Q8NGA0 311 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 NEIL3Q8TAT5 605 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 METTL6Q8TCB7 284 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 SPPL2AQ8TCT8 520 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 ISL2Q96A47 359 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 ADIPOR1Q96A54 375 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 TP53INP1Q96A56 240 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 C14orf79Q96F83 325 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 ZIM3Q96PE6 472 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 NXF5Q9H1B4 397 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 METTL7AQ9H8H3 244 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 VPS29Q9UBQ0 182 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 ZNF180Q9UJW8 692 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 ADAM29Q9UKF5 820 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 CAMK2AQ9UQM7 478 aa9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 SETD2Q9BYW2 2564 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-235ENST00000522730 GNG14A0A1W2PPG7 69 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 C1orf226A1L170 272 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 DLX3O60479 287 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 TRIM3O75382 744 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 NME6O75414 186 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 SASH3O75995 380 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 SNX4O95219 450 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 ZWINTO95229 277 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 KRT6AP02538 564 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 KRT6BP04259 564 aa9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 RPS17P08708 135 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 HOXD4P09016 255 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-235ENST00000522730 GABRA1P14867 456 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms