RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SPACA9Q96E40 222 aaPredicted RBP16.47■□□□□ 0.23
CLK4-211ENST00000522556 PPP1R36Q96LQ0 422 aa16.47■□□□□ 0.23
CLK4-211ENST00000522556 PAIP2Q9BPZ3 127 aaKnown RBP16.47■□□□□ 0.23
CLK4-211ENST00000522556 C1orf50Q9BV19 199 aa16.47■□□□□ 0.23
CLK4-211ENST00000522556 SH2D2AQ9NP31 389 aa16.47■□□□□ 0.23
CLK4-211ENST00000522556 TIMMDC1Q9NPL8 285 aa16.47■□□□□ 0.23
CLK4-211ENST00000522556 BCAP29Q9UHQ4 241 aa16.47■□□□□ 0.23
CLK4-211ENST00000522556 ENTPD4Q9Y227 616 aa16.47■□□□□ 0.23
CLK4-211ENST00000522556 MYO1GB0I1T2 1018 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 CDK2AP1O14519 115 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 BIRC5O15392 142 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 PEX11AO75192 247 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 AGFG2O95081 481 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 HSPA4LO95757 839 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 CHEK2O96017 543 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 FBXO45P0C2W1 286 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 ZNF24P17028 368 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
CLK4-211ENST00000522556 SERPINB5P36952 375 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 EMDP50402 254 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 ABCE1P61221 599 aaKnown RBP16.46■□□□□ 0.23
CLK4-211ENST00000522556 ELOAQ14241 798 aaKnown RBP16.46■□□□□ 0.23
CLK4-211ENST00000522556 C6orf163Q5TEZ5 329 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 C1QL3Q5VWW1 255 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 BICRALQ6AI39 1079 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 OPN5Q6U736 354 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 FGD2Q7Z6J4 655 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 CHERPQ8IWX8 916 aaKnown RBP16.46■□□□□ 0.23
CLK4-211ENST00000522556 GPALPP1Q8IXQ4 340 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 OR2M7Q8NG81 312 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 FAM76AQ8TAV0 307 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 SLC22A8Q8TCC7 542 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 ZNF675Q8TD23 568 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 CIDECQ96AQ7 238 aaPredicted RBP16.46■□□□□ 0.23
CLK4-211ENST00000522556 GPR137Q96N19 417 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 CCT7Q99832 543 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 PROK2Q9HC23 129 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 MIEF1Q9NQG6 463 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.46■□□□□ 0.236e-6■■□□□ 12.1
CLK4-211ENST00000522556 EHD3Q9NZN3 535 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 SEC14L3Q9UDX4 400 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 PSME2Q9UL46 239 aa16.46■□□□□ 0.23
CLK4-211ENST00000522556 FAM166BA8MTA8 275 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 HS6ST1O60243 411 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 MC3RP41968 323 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 FBXW4P57775 412 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 BST1Q10588 318 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 PDCD2Q16342 344 aaPredicted RBP16.45■□□□□ 0.22
CLK4-211ENST00000522556 CROCCP2Q86T23 111 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 ZFP62Q8NB50 900 aaPredicted RBP16.45■□□□□ 0.22
CLK4-211ENST00000522556 FAM98AQ8NCA5 519 aaKnown RBP16.45■□□□□ 0.22
CLK4-211ENST00000522556 FAM13CQ8NE31 585 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 OR7G1Q8NGA0 311 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 GLIPR2Q9H4G4 154 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 TUBA8Q9NY65 449 aaPredicted RBP16.45■□□□□ 0.22
CLK4-211ENST00000522556 SH3BGRL2Q9UJC5 107 aa16.45■□□□□ 0.22
CLK4-211ENST00000522556 CHCHD2Q9Y6H1 151 aaPredicted RBP16.45■□□□□ 0.22
CLK4-211ENST00000522556 NINQ8N4C6 2090 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 TMEM114B3SHH9 223 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 BCKDHAP12694 445 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 GSTM5P46439 218 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 SLC1A6P48664 564 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 NCBP2P52298 156 aaKnown RBP eCLIP16.44■□□□□ 0.221e-8■□□□□ 11
CLK4-211ENST00000522556 CORO7P57737 925 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 FOXO1Q12778 655 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 TMEM107Q6UX40 140 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 NPSR1Q6W5P4 371 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 ZNF551Q7Z340 670 aaPredicted RBP16.44■□□□□ 0.22
CLK4-211ENST00000522556 WDR53Q7Z5U6 358 aaPredicted RBP16.44■□□□□ 0.22
CLK4-211ENST00000522556 FAM9CQ8IZT9 166 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 GOLM1Q8NBJ4 401 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 OR52N2Q8NGI0 321 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 BBS4Q96RK4 519 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 TTTY12Q9BZ98 90 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 PNPOQ9NVS9 261 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 CNOT11Q9UKZ1 510 aaKnown RBP16.44■□□□□ 0.22
CLK4-211ENST00000522556 HRH3Q9Y5N1 445 aa16.44■□□□□ 0.22
CLK4-211ENST00000522556 KLRC4-KLRK1H3BQV0 150 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 CELA3AP09093 270 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 PTGR1Q14914 329 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 NTRK2Q16620 822 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 TTMPQ5BVD1 217 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 CMPK2Q5EBM0 449 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 C6orf136Q5SQH8 315 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 HHATQ5VTY9 493 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 HLA-DQA1Q5Y7H0 255 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 IKBIPQ70UQ0 350 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 LIX1Q8N485 282 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 SLC15A4Q8N697 577 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 PAQR8Q8TEZ7 354 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 METTL2AQ96IZ6 378 aaKnown RBP16.43■□□□□ 0.22
CLK4-211ENST00000522556 AMDHD1Q96NU7 426 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 SACM1LQ9NTJ5 587 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 TAS2R7Q9NYW3 318 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 NPFFR2Q9Y5X5 522 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 LIPGQ9Y5X9 500 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 ZNF407Q9C0G0 2248 aa16.43■□□□□ 0.22
CLK4-211ENST00000522556 LRRK2Q5S007 2527 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms