RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DCLK3Q9C098 648 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 MTIF3Q9H2K0 278 aaKnown RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 LPAR2Q9HBW0 351 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 RAVER2Q9HCJ3 691 aaKnown RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 POLE4Q9NR33 117 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 SEMA4GQ9NTN9 838 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 C20orf96Q9NUD7 363 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.65□□□□□ -1.82
SKP1-209ENST00000522552 ZNF701Q9NV72 531 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 C1orf123Q9NWV4 160 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 TECRQ9NZ01 308 aaKnown RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 GNG12Q9UBI6 72 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 SLC12A6Q9UHW9 1150 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ZNF175Q9Y473 711 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 SBNO1A3KN83 1393 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 KIR2DS5A0A0G2JLQ3 304 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 SMCO3A2RU48 225 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 OR6C65A6NJZ3 312 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 DBX1A6NMT0 343 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 YJEFN3A6XGL0 299 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 SRRM4A7MD48 611 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 PRR32B1ATL7 298 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 ZNF732B4DXR9 585 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 H3BTX0 84 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 KIR2DS3K7RE56 304 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 OVOL3O00110 214 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 TULP2O00295 520 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 P2RY10O00398 339 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 DLGAP1O14490 977 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 RS1O15537 224 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 LAMTOR5O43504 91 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 KDELR3O43731 214 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 NOBOXO60393 691 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 RNASEH1O60930 286 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 STK17BO94768 372 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 CHRM5P08912 532 aaPredicted RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 CTSAP10619 480 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 PRF1P14222 555 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 UQCRBP14927 111 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 CHRNB2P17787 502 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 TNNI1P19237 187 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 HTR5AP47898 357 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 PDX1P52945 283 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 HERVK_113P63132 956 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 ERVK-8P63133 956 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 PAX5Q02548 391 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 TRAP1Q12931 704 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 GPR50Q13585 617 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 GK3PQ14409 553 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 OR1C1Q15619 314 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 ODF4Q2M2E3 257 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 NDUFAF5Q5TEU4 345 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 ASPHD1Q5U4P2 390 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 FAM69BQ5VUD6 431 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 RHBDD2Q6NTF9 364 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 CCDC137Q6PK04 289 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 TMEM64Q6YI46 380 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 SSX9Q7RTT3 188 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 COX8CQ7Z4L0 72 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 C5orf24Q7Z6I8 188 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 SERPINA9Q86WD7 417 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 GPBP1Q86WP2 473 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 TBC1D10CQ8IV04 446 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 CHERPQ8IWX8 916 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 LGI4Q8N135 537 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 GABRG1Q8N1C3 465 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 RNF10Q8N5U6 811 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 TMEM163Q8TC26 289 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 MARCH1Q8TCQ1 289 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 DTX3LQ8TDB6 740 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 HCAR2Q8TDS4 363 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 SLC38A5Q8WUX1 472 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 BPIFA2Q96DR5 249 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 BBC3Q96PG8 261 aaPredicted RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 GFM1Q96RP9 751 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 COPS8Q99627 209 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 WDR77Q9BQA1 342 aaPredicted RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 ERVK-6Q9BXR3 956 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 POLDIP3Q9BY77 421 aaKnown RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 PARD6BQ9BYG5 372 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 MFFQ9GZY8 342 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 OR2AG1Q9H205 316 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 GAL3ST2Q9H3Q3 398 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 PSTPIP2Q9H939 334 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 ZNF275Q9NSD4 429 aaPredicted RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 PSMC3IPQ9P2W1 217 aaPredicted RBP3.65□□□□□ -1.83
SKP1-209ENST00000522552 SLC7A8Q9UHI5 535 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 GGA2Q9UJY4 613 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 ABCG2Q9UNQ0 655 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 MEMO1Q9Y316 297 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 CBY1Q9Y3M2 126 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 RAI2Q9Y5P3 530 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 DUSP10Q9Y6W6 482 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 COLEC10Q9Y6Z7 277 aa3.65□□□□□ -1.83
SKP1-209ENST00000522552 PTPRCP08575 1304 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 TEX13DA0A0J9YY54 714 aaPredicted RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 SERINC4A6NH21 518 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 MLNRO43193 412 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 LDB2O43679 373 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms