RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CDC42EP4Q9H3Q1 356 aaKnown RBP13.88□□□□□ -0.19
CSMD1-207ENST00000520451 METTL7AQ9H8H3 244 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 FARSBQ9NSD9 589 aaKnown RBP13.88□□□□□ -0.19
CSMD1-207ENST00000520451 CRIM1Q9NZV1 1036 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 CAMK2AQ9UQM7 478 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 PCDHA9Q9Y5H5 950 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 A0A1B0GTL3 188 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 C1orf226A1L170 272 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 SYT5O00445 386 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 GNB5O14775 395 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 ERAL1O75616 437 aaKnown RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 PPM1BO75688 479 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 KRT38O76015 456 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 OTCP00480 354 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 PDYNP01213 254 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 IL2RAP01589 272 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 ABCB1P08183 1280 aaPredicted RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 RPS17P08708 135 aaKnown RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 COL6A2P12110 1019 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 S1PR1P21453 382 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 CEACAM8P31997 349 aaPredicted RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 TIMP3P35625 211 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 FEN1P39748 380 aaKnown RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 PEX19P40855 299 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 IST1P53990 364 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 EIPR1Q53HC9 387 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 VASNQ6EMK4 673 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 LETMD1Q6P1Q0 360 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 FAM111BQ6SJ93 734 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 MMP21Q8N119 569 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 SELENOMQ8WWX9 145 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 HSPBAP1Q96EW2 488 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 TMEM41AQ96HV5 264 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 MRPL57Q9BQC6 102 aaKnown RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 ITPAQ9BY32 194 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 MRPL46Q9H2W6 279 aaKnown RBP13.87□□□□□ -0.19
CSMD1-207ENST00000520451 MAT2BQ9NZL9 334 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 BCAP29Q9UHQ4 241 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 CES1P1Q9UKY3 287 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 SNX6Q9UNH7 406 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 CFL2Q9Y281 166 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 ARHGAP21Q5T5U3 1957 aa13.87□□□□□ -0.19
CSMD1-207ENST00000520451 NF1P21359 2839 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 ITPR3Q14573 2671 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 TRIM49D1C9J1S8 452 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 POC1B-GALNT4F8VUJ3 575 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 PPP6CO00743 305 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 CDH16O75309 829 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 ATP1B1P05026 303 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 BMP7P18075 431 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 TSPAN8P19075 237 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 CSNK2A2P19784 350 aaPredicted RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 CDH13P55290 713 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 PLCXD2Q0VAA5 305 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 MGAT2Q10469 447 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 GALNT1Q10472 559 aaPredicted RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 MAP4K2Q12851 820 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 EXOSC7Q15024 291 aaKnown RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 SF3B4Q15427 424 aaKnown RBP eCLIP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 PRICKLE4Q2TBC4 344 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 NHSL2Q5HYW2 709 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 WIPI1Q5MNZ9 446 aaPredicted RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 DCST1Q5T197 706 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 FAM219BQ5XKK7 198 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 NSUN5P2Q63ZY6 315 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 TIGD3Q6B0B8 471 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 ANGPTL8Q6UXH0 198 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 ADCY4Q8NFM4 1077 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 OR1J4Q8NGS1 313 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 UHMK1Q8TAS1 419 aaKnown RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 TRPC4APQ8TEL6 797 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 ZNF483Q8TF39 744 aaPredicted RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 IFT81Q8WYA0 676 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 RNASE6Q93091 150 aaKnown RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 KLHL29Q96CT2 875 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 OMA1Q96E52 524 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 TRIB1Q96RU8 372 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 FMO2Q99518 471 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 SH3GL2Q99962 352 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 UGT2B28Q9BY64 529 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 TSPYL1Q9H0U9 437 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 CLEC4MQ9H2X3 399 aaPredicted RBP13.86□□□□□ -0.19
CSMD1-207ENST00000520451 BRF2Q9HAW0 419 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 PSME2Q9UL46 239 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 AKAP6Q13023 2319 aa13.86□□□□□ -0.19
CSMD1-207ENST00000520451 A8MT66 165 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 URI1O94763 535 aaPredicted RBP13.85□□□□□ -0.19
CSMD1-207ENST00000520451 NAGAP17050 411 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 CNTFP26441 200 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 PTPN6P29350 595 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 ALDH9A1P49189 494 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 ZNF136P52737 540 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 DUSP2Q05923 314 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 WHAMMP3Q1A5X7 153 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 FLYWCH1Q4VC44 716 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 DESI1Q6ICB0 168 aa13.85□□□□□ -0.19
CSMD1-207ENST00000520451 FAM180BQ6P0A1 224 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms