RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 ABCB1P08183 1280 aaPredicted RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 CPMP14384 443 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 NAGAP17050 411 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 PIK3R1P27986 724 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 PTGDSP41222 190 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 NRG3P56975 720 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 SORDQ00796 357 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 FOXD4Q12950 439 aaPredicted RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 PRICKLE4Q2TBC4 344 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 GGTA1PQ4G0N0 100 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 EIPR1Q53HC9 387 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 C10orf62Q5T681 223 aaPredicted RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 UBAP2Q5T6F2 1119 aaKnown RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 FRG2Q64ET8 278 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 TIGD3Q6B0B8 471 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 ADGRE4PQ86SQ3 457 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 PACS2Q86VP3 889 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 CCDC25Q86WR0 208 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 PRR22Q8IZ63 422 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 PLD6Q8N2A8 252 aaKnown RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 OR7G1Q8NGA0 311 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 OR4K14Q8NGD5 310 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 HGDQ93099 445 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 FRG2BQ96QU4 278 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 MRPL1Q9BYD6 325 aaKnown RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 RAB17Q9H0T7 212 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 NXF5Q9H1B4 397 aaKnown RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 NOL11Q9H8H0 719 aaKnown RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 PRM3Q9NNZ6 103 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 ZNF639Q9UID6 485 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 PCTPQ9UKL6 214 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 RPH3AQ9Y2J0 694 aaPredicted RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 UTP11Q9Y3A2 253 aaKnown RBP10.76□□□□□ -0.69
POLB-208ENST00000520008 NAV3Q8IVL0 2385 aa10.76□□□□□ -0.69
POLB-208ENST00000520008 ABCA4P78363 2273 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 A0A1B0GTL3 188 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 STX16-NPEPL1H3BU86 382 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 STX16O14662 325 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 SNPHO15079 494 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 PPM1BO75688 479 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 TRAPPC6AO75865 159 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 ATE1O95260 518 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 IL18BPO95998 194 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 RHOXF2BP0C7M4 288 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 EPXP11678 715 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 DNASE1P24855 282 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 SLCO1A2P46721 670 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 MASP1P48740 699 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 SERPINB8P50452 374 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 XKP51811 444 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 NAGLUP54802 743 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 ADAM8P78325 824 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 SF3B4Q15427 424 aaKnown RBP eCLIP10.75□□□□□ -0.69
POLB-208ENST00000520008 WIPI1Q5MNZ9 446 aaPredicted RBP10.75□□□□□ -0.69
POLB-208ENST00000520008 HLA-DQA1Q5Y7H0 255 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 DESI1Q6ICB0 168 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 SLC48A1Q6P1K1 146 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 ZNF572Q7Z3I7 529 aaPredicted RBP10.75□□□□□ -0.69
POLB-208ENST00000520008 CAMKMTQ7Z624 323 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 VWA5B2Q8N398 1253 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 METTL4Q8N3J2 472 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 PTGR2Q8N8N7 351 aaPredicted RBP10.75□□□□□ -0.69
POLB-208ENST00000520008 SIMC1Q8NDZ2 872 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 FAM83FQ8NEG4 500 aaPredicted RBP10.75□□□□□ -0.69
POLB-208ENST00000520008 ZPLD1Q8TCW7 415 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 TRPC4APQ8TEL6 797 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 CTHRC1Q96CG8 243 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 LRRC46Q96FV0 321 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 NSUN5Q96P11 429 aaKnown RBP10.75□□□□□ -0.69
POLB-208ENST00000520008 NODALQ96S42 347 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 ITPAQ9BY32 194 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 FUT8Q9BYC5 575 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 PLEKHF2Q9H8W4 249 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 CALHM2Q9HA72 323 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 ZDHHC18Q9NUE0 388 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 MAT2BQ9NZL9 334 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 CPSF2Q9P2I0 782 aaKnown RBP10.75□□□□□ -0.69
POLB-208ENST00000520008 CAMK2AQ9UQM7 478 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 PCDHA9Q9Y5H5 950 aa10.75□□□□□ -0.69
POLB-208ENST00000520008 C1orf226A1L170 272 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 TUBAL3A6NHL2 446 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 GNB5O14775 395 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 CDH16O75309 829 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 GOSR1O95249 250 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 CBX7O95931 251 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 ACTL6AO96019 429 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 RAF1P04049 648 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 KLK1P06870 262 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 RPS17P08708 135 aaKnown RBP10.74□□□□□ -0.69
POLB-208ENST00000520008 CPN1P15169 458 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 FOSL1P15407 271 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 PORP16435 677 aaPredicted RBP10.74□□□□□ -0.69
POLB-208ENST00000520008 CTSSP25774 331 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 TYK2P29597 1187 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 OPRM1P35372 400 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 PPP2R2AP63151 447 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 RPP38P78345 283 aaKnown RBP10.74□□□□□ -0.69
POLB-208ENST00000520008 DUSP2Q05923 314 aa10.74□□□□□ -0.69
POLB-208ENST00000520008 GALNT1Q10472 559 aaPredicted RBP10.74□□□□□ -0.69
POLB-208ENST00000520008 MAP4K2Q12851 820 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms