RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 B3GNT7Q8NFL0 401 aa11.12□□□□□ -0.63
SYNPO-204ENST00000519664 THAP3Q8WTV1 239 aaPredicted RBP11.12□□□□□ -0.63
SYNPO-204ENST00000519664 TP63Q9H3D4 680 aaPredicted RBP11.12□□□□□ -0.63
SYNPO-204ENST00000519664 Q9N2J8 555 aa11.12□□□□□ -0.63
SYNPO-204ENST00000519664 ANKMY1Q9P2S6 941 aa11.12□□□□□ -0.63
SYNPO-204ENST00000519664 CSNK1G3Q9Y6M4 447 aa11.12□□□□□ -0.63
SYNPO-204ENST00000519664 A0A1B0GVC2 190 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 A6NIN4 97 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 KRT33AO76009 404 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 IFNA6P05013 189 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 MC3RP41968 323 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 BLKP51451 505 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SYPL1Q16563 259 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 MICAQ29983 383 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ALG11Q2TAA5 492 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ASPGQ86U10 573 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TOMM5Q8N4H5 51 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TSTD1Q8NFU3 115 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SETD7Q8WTS6 366 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ERMAPQ96PL5 475 aaPredicted RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SLC2A11Q9BYW1 496 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 QRSL1Q9H0R6 528 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TAS2R16Q9NYV7 291 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 EIF3KQ9UBQ5 218 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 LOC100509620A0A075B734 347 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 DCKP27707 260 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TAS2R38P59533 333 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CBLBQ13191 982 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 DSG2Q14126 1118 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TSC22D1Q15714 1073 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 HNRNPA1L2Q32P51 320 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TBRG1Q3YBR2 411 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 MPP7Q5T2T1 576 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 B3GLCTQ6Y288 498 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 RNF111Q6ZNA4 994 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SERPINA11Q86U17 422 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 PHC2Q8IXK0 858 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 NRSN1Q8IZ57 195 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 OSTF1Q92882 214 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 EXTL2Q9UBQ6 330 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CYP8B1Q9UNU6 501 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SPTA1P02549 2419 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ANTXRLA6NF34 631 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TARM1B6A8C7 271 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 EMC8O43402 210 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TNFP01375 233 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CHRNB1P11230 501 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 HK1P19367 917 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 IMPA1P29218 277 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 DNASE1L1P49184 302 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 PUDPQ08623 228 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 XKRXQ6PP77 449 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CHCHD4Q8N4Q1 142 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 BCL7CQ8WUZ0 217 aaPredicted RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 FRMD6Q96NE9 622 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ENAMQ9NRM1 1142 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 COPS7AQ9UBW8 275 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CMAHPQ9Y471 501 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 FAM183AA6NL82 134 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 C12orf71A8MTZ7 269 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 C11orf98E9PRG8 122 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 DNAJB5O75953 348 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CXCR1P25024 350 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 MTNR1AP48039 350 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 STARP49675 285 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 VEZF1Q14119 521 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 EIF4HQ15056 248 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 ZNF181Q2M3W8 571 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 UGT3A2Q3SY77 523 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 C6orf132Q5T0Z8 1188 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 PLBD1Q6P4A8 553 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 USP53Q70EK8 1073 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 BTN2A1Q7KYR7 527 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 B3GNT8Q7Z7M8 397 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 Q8N9G6 341 aaPredicted RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SLC37A3Q8NCC5 494 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 OR2T33Q8NG76 320 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 LINC01599Q8WXQ3 324 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SGCDQ92629 289 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SLCO4A1Q96BD0 722 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 BCL2L14Q9BZR8 327 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 B3GNT4Q9C0J1 378 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 IKZF5Q9H5V7 419 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SRA1Q9HD15 236 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 IL23AQ9NPF7 189 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
SYNPO-204ENST00000519664 CA5BQ9Y2D0 317 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
SYNPO-204ENST00000519664 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
SYNPO-204ENST00000519664 PLD2O14939 933 aa11.1□□□□□ -0.63
SYNPO-204ENST00000519664 ENTPD6O75354 484 aa11.1□□□□□ -0.63
SYNPO-204ENST00000519664 ZNF45Q02386 682 aa11.1□□□□□ -0.63
SYNPO-204ENST00000519664 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
SYNPO-204ENST00000519664 YIPF7Q8N8F6 280 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms