RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, human

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-208	ENST00000518668	BTAF1	O14981	1849 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	INMT-MINDY4	F8WBC2	141 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	AOAH	P28039	575 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	MTNR1A	P48039	350 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	RPL6	Q02878	288 aa	Known RBP	13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	OCLN	Q16625	522 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	ADGRG5	Q8IZF4	528 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	DEFB126	Q9BYW3	111 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	LHX3	Q9UBR4	397 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	PCDHA9	Q9Y5H5	950 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	KIAA0513	O60268	411 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	TSPAN9	O75954	239 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	CYP27C1	Q4G0S4	372 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	TRNP1	Q6NT89	227 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	LIPI	Q6XZB0	460 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	ZNF852	Q6ZMS4	543 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	GPAT4	Q86UL3	456 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	OR8H3	Q8N146	312 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	TANK	Q92844	425 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	HHIPL1	Q96JK4	782 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	UBXN10	Q96LJ8	280 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	GAL3ST1	Q99999	423 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	FUNDC2	Q9BWH2	189 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	SOX17	Q9H6I2	414 aa	Predicted RBP	13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	RXFP3	Q9NSD7	469 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	ANKMY1	Q9P2S6	941 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668	WDR37	Q9Y2I8	494 aa		13.44	□□□□□ -0.26
DENND3-208	ENST00000518668		L7N2F9	121 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	RTCA	O00442	366 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	POLR1C	O15160	346 aa	Predicted RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SMAD6	O43541	496 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	VAMP2	P63027	116 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	STX12	Q86Y82	276 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SLC5A8	Q8N695	610 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SAMD12	Q8N8I0	201 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	OR6C4	Q8NGE1	309 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ZNF300	Q96RE9	604 aa	Predicted RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	NELL2	Q99435	816 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	CLMP	Q9H6B4	373 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ITGB4	P16144	1822 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ARPC4	P59998	168 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	CXCR4	P61073	352 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	CEACAM19	Q7Z692	300 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	DCP2	Q8IU60	420 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PAPD5	Q8NDF8	572 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	OR2T4	Q8NH00	348 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	UBTD2	Q8WUN7	234 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ASB11	Q8WXH4	323 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ACSL6	Q9UKU0	697 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PADI2	Q9Y2J8	665 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	C17orf113	A0A1B0GUU1	675 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ITGAM	P11215	1152 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SLC9A3	P48764	834 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	FOXA1	P55317	472 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	HHEX	Q03014	270 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	HSD11B1L	Q7Z5J1	315 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	VTCN1	Q7Z7D3	282 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SLC41A3	Q96GZ6	507 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	NAA11	Q9BSU3	229 aa	Predicted RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	APOO	Q9BUR5	198 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	TIGAR	Q9NQ88	270 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ALKBH4	Q9NXW9	302 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PPP4R1L	Q9P1A2	415 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	KIR2DS5	A0A0G2JLQ3	304 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668		A0A0G2JNG1	304 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	KIR2DS3	K7RE56	304 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	H2BFM	P0C1H6	154 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	TIMP2	P16035	220 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	CRYZ	Q08257	329 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	KIR2DS5	Q14953	304 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	SCGB2B2	Q4G0G5	96 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	TMEM225	Q6GV28	225 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ALKBH2	Q6NS38	261 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ARMCX6	Q7L4S7	300 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	NAGS	Q8N159	534 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	INPP5K	Q9BT40	448 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	GTPBP2	Q9BX10	602 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PREB	Q9HCU5	417 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	MYH4	Q9Y623	1939 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PIGBOS1	A0A0B4J2F0	54 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PRH1	P02810	166 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	GKN3P	P0CG01	181 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	FRK	P42685	505 aa	Predicted RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ARF5	P84085	180 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	E2F1	Q01094	437 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	TMEM236	Q5W0B7	351 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ZNF534	Q76KX8	674 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	OR51A7	Q8NH64	312 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ACPT	Q9BZG2	426 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	METTL8	Q9H825	291 aa	Known RBP	13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	NUDT15	Q9NV35	164 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	ADAM29	Q9UKF5	820 aa		13.43	□□□□□ -0.26
DENND3-208	ENST00000518668	PRAMEF26	H0Y7S4	382 aa		13.42	□□□□□ -0.26
DENND3-208	ENST00000518668	SPARC	P09486	303 aa		13.42	□□□□□ -0.26
DENND3-208	ENST00000518668	MAP2K3	P46734	347 aa		13.42	□□□□□ -0.26
DENND3-208	ENST00000518668	PRKCD	Q05655	676 aa		13.42	□□□□□ -0.26
DENND3-208	ENST00000518668	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms