RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 VPS26AO75436 327 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 TOM1L1O75674 476 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 STBD1O95210 358 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 SEC24AO95486 1093 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 PRAMEF12O95522 483 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 APRTP07741 180 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 CD59P13987 128 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 ANPEPP15144 967 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 CYP2F1P24903 491 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 HLA-FP30511 346 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 TNFRSF4P43489 277 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 LEPRP48357 1165 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 CLCN4P51793 760 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 PRELPP51888 382 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 CLDN17P56750 224 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 KCNK10P57789 538 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 TRAP1Q12931 704 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 IL24Q13007 206 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 MRPL28Q13084 256 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 HERC3Q15034 1050 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RABL6Q3YEC7 729 aaPredicted RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 SLC36A3Q495N2 470 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 NADK2Q4G0N4 442 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 FILIP1LQ4L180 1135 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 XKR3Q5GH77 459 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 SLC25A53Q5H9E4 307 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 CFAP157Q5JU67 520 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 IL23RQ5VWK5 629 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 NKAIN2Q5VXU1 208 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 LRRC8BQ6P9F7 803 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RTN4RL2Q86UN3 420 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 TDHQ8IZJ6 230 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 COLGALT1Q8NBJ5 622 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RNF149Q8NC42 400 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 PRSS33Q8NF86 280 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 STEAP2Q8NFT2 490 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 KBTBD8Q8NFY9 601 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 OR52K2Q8NGK3 314 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 OR13C3Q8NGS6 347 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 OR2T34Q8NGX1 318 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 SAP25Q8TEE9 199 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 CHPT1Q8WUD6 406 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 FCGR1BQ92637 280 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 AZIN2Q96A70 460 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 C16orf58Q96GQ5 468 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RPGRIP1Q96KN7 1286 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 SYT15Q9BQS2 421 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 ALKBH7Q9BT30 221 aaPredicted RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 URM1Q9BTM9 101 aaKnown RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 TBCDQ9BTW9 1192 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 NTMT1Q9BV86 223 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 UBXN6Q9BZV1 441 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RIMS4Q9H426 269 aaPredicted RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 TLE6Q9H808 572 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 DCLRE1BQ9H816 532 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RNF121Q9H920 327 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 ACTR8Q9H981 624 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 MARCH7Q9H992 704 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 TM9SF3Q9HD45 589 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 MAN2C1Q9NTJ4 1040 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 EXOC1Q9NV70 894 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 NMRK1Q9NWW6 199 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 NDUFA13Q9P0J0 144 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 PAK5Q9P286 719 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 ATXN10Q9UBB4 475 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 RABL2AQ9UBK7 228 aaPredicted RBP2.73□□□□□ -1.97
HERC4-215ENST00000515753 IL20RAQ9UHF4 553 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 SMC3Q9UQE7 1217 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 ASB3Q9Y575 518 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 A0A1W2PP64 1363 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 ADCY9O60503 1353 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 LMO7Q8WWI1 1683 aa2.73□□□□□ -1.97
HERC4-215ENST00000515753 C15orf38-AP3S2A0A0A6YYH1 394 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 A0A0U1RRA0 63 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 A0A1B0GUL7 405 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 MEX3AA1L020 520 aaKnown RBP2.72□□□□□ -1.97
HERC4-215ENST00000515753 CHUKO15111 745 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 ARPC1BO15143 372 aaKnown RBP2.72□□□□□ -1.97
HERC4-215ENST00000515753 LANCL1O43813 399 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 LRP3O75074 770 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 CSO75390 466 aaKnown RBP2.72□□□□□ -1.97
HERC4-215ENST00000515753 CSDE1O75534 798 aaKnown RBP2.72□□□□□ -1.97
HERC4-215ENST00000515753 NXPH2O95156 264 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 CHRNGP07510 517 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 GSTA2P09210 222 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 NUDT17P0C025 328 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 CT45A8P0DMV1 189 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 CT45A9P0DMV2 189 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 EPB41P11171 864 aaKnown RBP2.72□□□□□ -1.97
HERC4-215ENST00000515753 GOT1P17174 413 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 HTR2AP28223 471 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 TMOD1P28289 359 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 PTPN4P29074 926 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 PRDX6P30041 224 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 SRD5A2P31213 254 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 CSTF2P33240 577 aaKnown RBP eCLIP2.72□□□□□ -1.97
HERC4-215ENST00000515753 CETN2P41208 172 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 ALDH3B1P43353 468 aa2.72□□□□□ -1.97
HERC4-215ENST00000515753 NKX2-1P43699 371 aaPredicted RBP2.72□□□□□ -1.97
HERC4-215ENST00000515753 SLC6A8P48029 635 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms