RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	PNP	P00491	289 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	FCER2	P06734	321 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TPM2	P07951	284 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	MAGEB1	P43366	347 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TDO2	P48775	406 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TNFSF10	P50591	281 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	ST8SIA6	P61647	398 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	KLHL30	Q0D2K2	578 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	HEPACAM	Q14CZ8	416 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	STXBP2	Q15833	593 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	HAGH	Q16775	308 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TYSND1	Q2T9J0	566 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	WSCD2	Q2TBF2	565 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	ANKRD20A4	Q4UJ75	823 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	ANKRD20A8P	Q5CZ79	823 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	ANKRD20A2	Q5SQ80	823 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	ANKRD20A1	Q5TYW2	823 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	ANKRD20A3	Q5VUR7	823 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	LINC00696	Q6ZRV3	163 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	GPR142	Q7Z601	462 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	WDR49	Q8IV35	697 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	U2AF1L4	Q8WU68	220 aa	Known RBP	2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	MAGEB18	Q96M61	343 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	PRAM1	Q96QH2	718 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TRIM9	Q9C026	710 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	CXXC4	Q9H2H0	198 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TIGAR	Q9NQ88	270 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TECR	Q9NZ01	308 aa	Known RBP	2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	FETUB	Q9UGM5	382 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	PSORS1C1	Q9UIG5	152 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	MOK	Q9UQ07	419 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	LIPT1	Q9Y234	373 aa		2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	RRP15	Q9Y3B9	282 aa	Known RBP	2.86	□□□□□ -1.95
MATR3-223	ENST00000514402	TMEM129	A0AVI4	362 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	NDC80	O14777	642 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	DUSP14	O95147	198 aa	Known RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	PRB2	P02812	416 aa	Predicted RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	MBL2	P11226	248 aa	Predicted RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ELK1	P19419	428 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	CYP3A5	P20815	502 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	HMGCL	P35914	325 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	NDST1	P52848	882 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	KCNK10	P57789	538 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	EIF4EBP2	Q13542	120 aa	Predicted RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	KBTBD12	Q3ZCT8	623 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ANKDD1A	Q495B1	522 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ACER2	Q5QJU3	275 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	TAF3	Q5VWG9	929 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	FAM219B	Q5XKK7	198 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	TMEM270	Q6UE05	265 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	GBP6	Q6ZN66	633 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	RABEPK	Q7Z6M1	372 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ASPG	Q86U10	573 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	HOOK3	Q86VS8	718 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	APOBEC3F	Q8IUX4	373 aa	Known RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	PEX5L	Q8IYB4	626 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	CLYBL	Q8N0X4	340 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ZBTB44	Q8NCP5	570 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ZNF540	Q8NDQ6	660 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	OR6M1	Q8NGM8	313 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	TFB1M	Q8WVM0	346 aa	Known RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	AP2M1	Q96CW1	435 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	NUS1	Q96E22	293 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	C16orf45	Q96MC5	204 aa	Predicted RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	PANX3	Q96QZ0	392 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	OR5M11	Q96RB7	305 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	UTP14A	Q9BVJ6	771 aa	Known RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	C1orf21	Q9H246	121 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	IL1RAPL2	Q9NP60	686 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	SEPT10	Q9P0V9	454 aa		2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	HOOK1	Q9UJC3	728 aa	Known RBP	2.85	□□□□□ -1.95
MATR3-223	ENST00000514402	ATAD2B	Q9ULI0	1458 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402		A0A0A6YYD4	124 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	WI2-2373I1.2	A0A1W2PRP0	233 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	RGSL1	A5PLK6	1076 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	EFCAB7	A8K855	629 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	SLC33A1	O00400	549 aa	Predicted RBP	2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	SMPD2	O60906	423 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	BCAS2	O75934	225 aa	Predicted RBP	2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	REC8	O95072	547 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	STBD1	O95210	358 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	GAS8	O95995	478 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	IGHV3-9	P01782	118 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	CPA3	P15088	417 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	SLC7A2	P52569	658 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	WNT4	P56705	351 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	STARD6	P59095	220 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	GIT2	Q14161	759 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	TAF7	Q15545	349 aa	Predicted RBP	2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	SHROOM1	Q2M3G4	852 aa	Predicted RBP	2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	HFE	Q30201	348 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	FUT11	Q495W5	492 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	SLC39A12	Q504Y0	691 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	MPPE1	Q53F39	396 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	PAN3	Q58A45	887 aa	Known RBP	2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	MFSD7	Q6UXD7	560 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	ISLR2	Q6UXK2	745 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	STOX1	Q6ZVD7	989 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	CNTN4	Q8IWV2	1026 aa		2.84	□□□□□ -1.95
MATR3-223	ENST00000514402	SFRP1	Q8N474	314 aa		2.84	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms