RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZFAND5O76080 213 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 CPSF4O95639 269 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 C1QCP02747 245 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 GPX3P22352 226 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 S100A3P33764 101 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 MPIP34949 423 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 RPL3P39023 403 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 FRKP42685 505 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 KIR3DL1P43629 444 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZFP36L2P47974 494 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 MANFP55145 182 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 SLC37A1P57057 533 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 C21orf58P58505 322 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 RNF4P78317 190 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 FUT7Q11130 342 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF155Q12901 538 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 GAB1Q13480 694 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 EBPQ15125 230 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 GSTA3Q16772 222 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 LACTB2Q53H82 288 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 FHL5Q5TD97 284 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 AGAP7PQ5VUJ5 663 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 TMEM64Q6YI46 380 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 HSDL2Q6YN16 418 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 GK5Q6ZS86 529 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 PTRH1Q86Y79 214 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 PRR22Q8IZ63 422 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF615Q8N8J6 731 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 PLPP7Q8NBV4 271 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 OR4A15Q8NGL6 344 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 OR5AK3PQ8NH89 298 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 C16orf52Q8NHV5 167 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZFP28Q8NHY6 868 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF675Q8TD23 568 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 VPS33AQ96AX1 596 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 CTHRC1Q96CG8 243 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 COQ8BQ96D53 544 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF764Q96H86 408 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ART5Q96L15 291 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 AGAP4Q96P64 663 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 LMF1Q96S06 567 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZBTB18Q99592 522 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 INPP5KQ9BT40 448 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 BHLHE41Q9C0J9 482 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 WWTR1Q9GZV5 400 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 OR10A5Q9H207 317 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF385DQ9H6B1 395 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 CXorf36Q9H7Y0 433 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 SDR39U1Q9NRG7 319 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 SIRT3Q9NTG7 399 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ATAD3AQ9NVI7 634 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 DDX18Q9NVP1 670 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZIM2Q9NZV7 527 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 KLHL14Q9P2G3 628 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 SNX8Q9Y5X2 465 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ATRXP46100 2492 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 GMNCA6NCL1 334 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SYNDIG1LA6NDD5 238 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 UPK1AO00322 258 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 PRAMEF2O60811 474 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ITGA10O75578 1167 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC22A3O75751 556 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 OR2J2O76002 312 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 WDPCPO95876 746 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ICAM2P13598 275 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 GALNSP34059 522 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CDKN2CP42773 168 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 NR0B1P51843 470 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CLNS1AP54105 237 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 PRKAG1P54619 331 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CASP9P55211 416 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SOX8P57073 446 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CORO7P57737 925 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 HBA1P69905 142 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 MAP4K2Q12851 820 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 MFAP5Q13361 173 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SQLEQ14534 574 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 AGKQ53H12 422 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CRB2Q5IJ48 1285 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 JMJD6Q6NYC1 403 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ISLR2Q6UXK2 745 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 NPSR1Q6W5P4 371 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ASB18Q6ZVZ8 466 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC29A4Q7RTT9 530 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SPATA21Q7Z572 469 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 CAMKMTQ7Z624 323 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 RPS19BP1Q86WX3 136 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 FUNDC1Q8IVP5 155 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SAMD14Q8IZD0 417 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC5A8Q8N695 610 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 TESCQ96BS2 214 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ELP4Q96EB1 424 aa9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 ZBED6CLQ96FA7 236 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 PRPF18Q99633 342 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SMAD5Q99717 465 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-209ENST00000513818 SIKE1Q9BRV8 207 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms