RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CFLARO15519 480 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 B4GALT2O60909 372 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 CLEC3AO75596 197 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 SLC22A3O75751 556 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 NPPAP01160 153 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 KRT6AP02538 564 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 KRT6BP04259 564 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 COL8A1P27658 744 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 CD96P40200 585 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 ARL1P40616 181 aaPredicted RBP9.18□□□□□ -0.94
CCL28-203ENST00000513525 HNF4AP41235 474 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 KRT6CP48668 564 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 KCNK10P57789 538 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 BTG2P78543 158 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 RCAN2Q14206 197 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 E2F2Q14209 437 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 FLOT2Q14254 428 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 SLBPQ14493 270 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCL28-203ENST00000513525 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
CCL28-203ENST00000513525 TCHHL1Q5QJ38 904 aaPredicted RBP9.18□□□□□ -0.94
CCL28-203ENST00000513525 Q6ZSR9 355 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 FJX1Q86VR8 437 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 KRT78Q8N1N4 520 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 HORMAD2Q8N7B1 307 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 TMEM178AQ8NBL3 297 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 NFAM1Q8NET5 270 aaPredicted RBP9.18□□□□□ -0.94
CCL28-203ENST00000513525 OR9I1Q8NGQ6 314 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 OR2T11Q8NH01 316 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 SLC26A7Q8TE54 656 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 ADAMTS18Q8TE60 1221 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 MS4A6EQ96DS6 147 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 ASB9Q96DX5 294 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 WDR34Q96EX3 536 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 GPATCH1Q9BRR8 931 aaKnown RBP9.18□□□□□ -0.94
CCL28-203ENST00000513525 VCX3BQ9H321 246 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 TRIM45Q9H8W5 580 aaPredicted RBP9.18□□□□□ -0.94
CCL28-203ENST00000513525 NECTIN3Q9NQS3 549 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 DNAJC11Q9NVH1 559 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 ASIC5Q9NY37 505 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 TMEM181Q9P2C4 612 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 SEC14L3Q9UDX4 400 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 LRBAP50851 2863 aa9.18□□□□□ -0.94
CCL28-203ENST00000513525 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 SERTM1A2A2V5 107 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ANKDD1BA6NHY2 528 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 MANBAO00462 879 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ACOT8O14734 319 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 CLGNO14967 610 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 LSM1O15116 133 aaKnown RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 UGDHO60701 494 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ZG16O60844 167 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ULK1O75385 1050 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 EEDO75530 441 aaKnown RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 NEURL1O76050 574 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 CLDN9O95484 217 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 TBX6O95947 436 aaPredicted RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 ACADSP16219 412 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 CAPN3P20807 821 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 MAOAP21397 527 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ZNF10P21506 573 aaPredicted RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 CA7P43166 264 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 DIO3P55073 304 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 RAB38P57729 211 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 PMP22Q01453 160 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 RBPJQ06330 500 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 TAF11Q15544 211 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 OR1C1Q15619 314 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 RNFT1Q5M7Z0 435 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 C1QL3Q5VWW1 255 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 DHDDSQ86SQ9 333 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 RPS19BP1Q86WX3 136 aaKnown RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 SLC34A3Q8N130 599 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 L3MBTL4Q8NA19 623 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 FNDC5Q8NAU1 212 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 APCDD1LQ8NCL9 501 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 OR2L5Q8NG80 312 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 THAP3Q8WTV1 239 aaPredicted RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 DNAJC9Q8WXX5 260 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 SPDL1Q96EA4 605 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 RSRC1Q96IZ7 334 aaKnown RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 QRFPRQ96P65 431 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 EFCAB11Q9BUY7 163 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 RHBGQ9H310 441 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 CDCP1Q9H5V8 836 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ACTR8Q9H981 624 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 SLC52A3Q9NQ40 469 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 NMRK1Q9NWW6 199 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ADA2Q9NZK5 511 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 C6orf203Q9P0P8 240 aaPredicted RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 ABCD2Q9UBJ2 740 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 GIMAP2Q9UG22 337 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 CD300AQ9UGN4 299 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 LEF1Q9UJU2 399 aaPredicted RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 PPIEQ9UNP9 301 aaKnown RBP9.17□□□□□ -0.94
CCL28-203ENST00000513525 CCL27Q9Y4X3 112 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 ARHGAP21Q5T5U3 1957 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 FREM3P0C091 2139 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
CCL28-203ENST00000513525 HCFC1P51610 2035 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms