RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	CCDC124	Q96CT7	223 aa	Known RBP	5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	TMA16	Q96EY4	203 aa	Known RBP	5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	PELI1	Q96FA3	418 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	AMDHD1	Q96NU7	426 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	ACTRT3	Q9BYD9	372 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	OR2B2	Q9GZK3	357 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	SEBOX	Q9HB31	216 aa	Predicted RBP	5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	FOLH1B	Q9HBA9	442 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	HINT3	Q9NQE9	182 aa	Known RBP	5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	SLC2A4RG	Q9NR83	387 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	WARS2	Q9UGM6	360 aa	Known RBP	5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	URGCP-MRPS24	S4R325	110 aa		5.75	□□□□□ -1.49
CHD1-208	ENST00000512392	ATXN2	Q99700	1313 aa	Known RBP	5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	PPIAL4E	A0A075B759	164 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392		A0A1W2PQ72	361 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	CHUK	O15111	745 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	LRCH4	O75427	683 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	IL6	P05231	212 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	CD63	P08962	238 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	CTXN2	P0C2S0	81 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	UBC	P0CG48	685 aa	Known RBP	5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	PPIAL4F	P0DN26	164 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	TNNI1	P19237	187 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	UQCRFS1	P47985	274 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	METAP2	P50579	478 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	ATP1B3	P54709	279 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	MBTD1	Q05BQ5	628 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	SMARCB1	Q12824	385 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	ALX1	Q15699	326 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	ZSWIM7	Q19AV6	140 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	RHBDF2	Q6PJF5	856 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	RTL4	Q6ZR62	310 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	AMIGO1	Q86WK6	493 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	PALB2	Q86YC2	1186 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	GPSM1	Q86YR5	675 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	ADHFE1	Q8IWW8	467 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	FAM3C	Q92520	227 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	OTUB2	Q96DC9	234 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	RIT2	Q99578	217 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	NDN	Q99608	321 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	HSD17B14	Q9BPX1	270 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	PARD6B	Q9BYG5	372 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	SEMA4G	Q9NTN9	838 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	NLGN3	Q9NZ94	848 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	NDRG3	Q9UGV2	375 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	BCAP29	Q9UHQ4	241 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	C3orf18	Q9UK00	162 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	ABCG2	Q9UNQ0	655 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	PPIAL4A	Q9Y536	164 aa		5.74	□□□□□ -1.49
CHD1-208	ENST00000512392	MAP3K15	Q6ZN16	1313 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	PRSS51	A0A1B0GVH4	220 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	CENPBD1	B2RD01	187 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	LEFTY2	O00292	366 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ZBTB5	O15062	677 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	TRIAP1	O43715	76 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	GMDS	O60547	372 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ADRB1	P08588	477 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	UBTFL1	P0CB47	393 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	PI3	P19957	117 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	FCAR	P24071	287 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	TEAD1	P28347	426 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	KIR3DL2	P43630	455 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	LIMS1	P48059	325 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	MRPL19	P49406	292 aa	Known RBP	5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	COMP	P49747	757 aa	Predicted RBP	5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	CYP2J2	P51589	502 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	PSMD7	P51665	324 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	HERVK_113	P63132	956 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ERVK-25	P63136	954 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	JAG1	P78504	1218 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	PSG6	Q00889	435 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	IFFO1	Q0D2I5	559 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	NPTX1	Q15818	432 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	PLK5	Q496M5	336 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ACTBL2	Q562R1	376 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	MIIP	Q5JXC2	388 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	AGBL4	Q5VU57	503 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	SIGIRR	Q6IA17	410 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	OR5M10	Q6IEU7	315 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	PRSS57	Q6UWY2	283 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	TPRG1	Q6ZUI0	275 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ZNF534	Q76KX8	674 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	CMTM8	Q8IZV2	173 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ARFGAP1	Q8N6T3	406 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	LRRC75A	Q8NAA5	344 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	POC1A	Q8NBT0	407 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	C10orf35	Q96D05	121 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	GRAMD2B	Q96HH9	432 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	KAZALD1	Q96I82	304 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	FRG2B	Q96QU4	278 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	CIB1	Q99828	191 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	MED10	Q9BTT4	135 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	DPH7	Q9BTV6	452 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	CCDC28B	Q9BUN5	200 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	BDH2	Q9BUT1	245 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	ERVK-6	Q9BXR3	956 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	KRTAP4-8	Q9BYQ9	185 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	TPSD1	Q9BZJ3	242 aa		5.73	□□□□□ -1.49
CHD1-208	ENST00000512392	OR10A2	Q9H208	303 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms