RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	MOAP1	Q96BY2	351 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	C11orf24	Q96F05	449 aa	Predicted RBP	6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	C7orf26	Q96N11	449 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	TSSK3	Q96PN8	268 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	SIKE1	Q9BRV8	207 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	DPY30	Q9C005	99 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	OR10A5	Q9H207	317 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	ACSS1	Q9NUB1	689 aa	Predicted RBP	6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	DDX18	Q9NVP1	670 aa	Known RBP	6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	QPCTL	Q9NXS2	382 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	ASIC5	Q9NY37	505 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	PLA2G3	Q9NZ20	509 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	CES1P1	Q9UKY3	287 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	RABL2B	Q9UNT1	228 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340	PCDHGB3	Q9Y5G1	929 aa		6.94	□□□□□ -1.3
NR1I3-231	ENST00000512340		A0A087WV62	115 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	MYOCOS	A0A1B0GUC4	107 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	ATP6AP2	A0A1C7CYW4	349 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TMEM233	B4DJY2	109 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TCP11X1	B4DZS4	312 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	ACOT7	O00154	380 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	WWP2	O00308	870 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	POLR3G	O15318	223 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	AKAP10	O43572	662 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	ITM2A	O43736	263 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	HS6ST1	O60243	411 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	PLOD3	O60568	738 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	SNN	O75324	88 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	PRKRA	O75569	313 aa	Known RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	ATP6AP2	O75787	350 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	OR2J2	O76002	312 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	DDAH2	O95865	285 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	IGKV3-11	P04433	115 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	SP1	P08047	785 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	KIT	P10721	976 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	IDO1	P14902	403 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	FOSL1	P15407	271 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	NAGA	P17050	411 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	SDC1	P18827	310 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	GCK	P35557	465 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	CD96	P40200	585 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	CLK3	P49761	638 aa	Known RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	ANXA11	P50995	505 aa	Known RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	MNAT1	P51948	309 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	CASP6	P55212	293 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	RAE1	P78406	368 aa	Known RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TP53BP2	Q13625	1128 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TUBA3C	Q13748	450 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	KIAA0040	Q15053	153 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	INPP5J	Q15735	1006 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	MAPKAPK3	Q16644	382 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	SPDYE7P	Q495Y7	208 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	NADK2	Q4G0N4	442 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	RFTN2	Q52LD8	501 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TTMP	Q5BVD1	217 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	PIGG	Q5H8A4	983 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TBCEL	Q5QJ74	424 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	FCRLB	Q6BAA4	426 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TUBA3E	Q6PEY2	450 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	PAOX	Q6QHF9	649 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	RGS9BP	Q6ZS82	235 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	EID3	Q8N140	333 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	KIF2B	Q8N4N8	673 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	RBMXL3	Q8N7X1	1067 aa	Known RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	GLB1L3	Q8NCI6	653 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	HSPBAP1	Q96EW2	488 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	CNRIP1	Q96F85	164 aa	Predicted RBP	6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	FCRL1	Q96LA6	429 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	MAGEB18	Q96M61	343 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	NUF2	Q9BZD4	464 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	WWTR1	Q9GZV5	400 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TUBB1	Q9H4B7	451 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	AKTIP	Q9H8T0	292 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	MEAF6	Q9HAF1	191 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	NEUROD4	Q9HD90	331 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340		Q9N2J8	555 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	SACM1L	Q9NTJ5	587 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	CNIH4	Q9P003	139 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	B4GALT7	Q9UBV7	327 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	ATP6V1H	Q9UI12	483 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	TRIM33	Q9UPN9	1127 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	OR10H1	Q9Y4A9	318 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	CCL27	Q9Y4X3	112 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	SVIL	O95425	2214 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340	LRRK2	Q5S007	2527 aa		6.93	□□□□□ -1.3
NR1I3-231	ENST00000512340		A0A1W2PRB8	838 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	MYO1G	B0I1T2	1018 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	TGFBR3L	H3BV60	316 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	PDLIM1	O00151	329 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	MASP2	O00187	686 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	SCAMP2	O15127	329 aa	Known RBP	6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	UBD	O15205	165 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	CFLAR	O15519	480 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	DIAPH2	O60879	1101 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	LRAT	O95237	230 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	PDGFA	P04085	211 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	JUN	P05412	331 aa	Known RBP	6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	CELA2A	P08217	269 aa		6.92	□□□□□ -1.3
NR1I3-231	ENST00000512340	TROVE2	P10155	538 aa	Known RBP eCLIP	6.92	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms