RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 MED18Q9BUE0 208 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 DDX28Q9NUL7 540 aaKnown RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 KCND3Q9UK17 655 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 CAB39Q9Y376 341 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-205ENST00000511316 KCNE2Q9Y6J6 123 aa12.17□□□□□ -0.46
HMGB2-205ENST00000511316 GABRR3A8MPY1 467 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PRAMEF26H0Y7S4 382 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 GPR39O43194 453 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PSIP1O75475 530 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 HSMCR30P0CW71 290 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 TNFSF8P32971 234 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 GSTM5P46439 218 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 CLDN2P57739 230 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ILKQ13418 452 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PDE7AQ13946 482 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 TSTQ16762 297 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 HIST2H2AA3Q6FI13 130 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 FRMPD2BQ6IN97 320 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 KIAA1161Q6NSJ0 714 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 MED27Q6P2C8 311 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 MBOAT1Q6ZNC8 495 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PIP4P1Q86T03 277 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 RAVER1Q8IY67 606 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PEX5LQ8IYB4 626 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 CLECL1Q8IZS7 167 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 OR8H2Q8N162 312 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 SLC22A18ASQ8N1D0 253 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 CYP4Z2PQ8N1L4 340 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 GPR26Q8NDV2 337 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 OR8J1Q8NGP2 316 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 WDR34Q96EX3 536 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 OR2A14Q96R47 310 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 COQ7Q99807 217 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 DPH2Q9BQC3 489 aaPredicted RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ASPNQ9BXN1 380 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 GON7Q9BXV9 100 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 NDEL1Q9GZM8 345 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 MYNNQ9NPC7 610 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 MBNL1Q9NR56 388 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 NDUFB11Q9NX14 153 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 FTSJ1Q9UET6 329 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 CMAHPQ9Y471 501 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ARID1BQ8NFD5 2236 aaPredicted RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 LRRK1Q38SD2 2015 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 HYKKA2RU49 373 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 TLR4O00206 839 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 FAAHO00519 579 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ARAFP10398 606 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 OSMP13725 252 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 LHCGRP22888 699 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 NUDT1P36639 197 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PCBP3P57721 371 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 RAB25P57735 213 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 NXPH1P58417 271 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ALDH6A1Q02252 535 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 COX10Q12887 443 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 DOC2AQ14183 400 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 AGERQ15109 404 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 PTGES3Q15185 160 aaKnown RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 OCLNQ16625 522 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 METAP1DQ6UB28 335 aaPredicted RBP12.16□□□□□ -0.46
HMGB2-205ENST00000511316 CASP12Q6UXS9 341 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 LIPIQ6XZB0 460 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 IQCHQ86VS3 1027 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 UBE2FQ969M7 185 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 VPS35Q96QK1 796 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ZDHHC5Q9C0B5 715 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 SLC25A19Q9HC21 320 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 TMEM9BQ9NQ34 198 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 ACER3Q9NUN7 267 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 SH3BP4Q9P0V3 963 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 AASSQ9UDR5 926 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 N6AMT1Q9Y5N5 214 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 HS3ST3A1Q9Y663 406 aa12.16□□□□□ -0.46
HMGB2-205ENST00000511316 DSPPQ9NZW4 1301 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 GNG14A0A1W2PPG7 69 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 PROM1O43490 865 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 PCDH7O60245 1069 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 SYPP08247 313 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 GAAP10253 952 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 HNRNPA2B1P22626 353 aaKnown RBP12.15□□□□□ -0.46
HMGB2-205ENST00000511316 TCEA1P23193 301 aaKnown RBP12.15□□□□□ -0.46
HMGB2-205ENST00000511316 CFL1P23528 166 aaKnown RBP12.15□□□□□ -0.46
HMGB2-205ENST00000511316 HLA-DMAP28067 261 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 ID4P47928 161 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 SPINT3P49223 89 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 CRYBA2P53672 197 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 PSPHP78330 225 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 SPHARQ15513 63 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 TMEM44Q2T9K0 475 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 WSCD2Q2TBF2 565 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 ATP13A5Q4VNC0 1218 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms