RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 BUD31P41223 144 aaPredicted RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 ARFIP1P53367 373 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 TRAF3Q13114 568 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 BIKQ13323 160 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 GTF2H2Q13888 395 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 PCBP2Q15366 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX41-210ENST00000509576 LTB4RQ15722 352 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 GRTP1Q5TC63 336 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 TMEM198Q66K66 360 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 GTF2H2CQ6P1K8 395 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 PRIMA1Q86XR5 153 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 GALNT12Q8IXK2 581 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 GOT1L1Q8NHS2 421 aaPredicted RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 FBXO25Q8TCJ0 367 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 CTHRC1Q96CG8 243 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 ITPAQ9BY32 194 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 MRPL1Q9BYD6 325 aaKnown RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 ACTR8Q9H981 624 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 NMRAL1Q9HBL8 299 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 SNX15Q9NRS6 342 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 FARSBQ9NSD9 589 aaKnown RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX41-210ENST00000509576 GALNT8Q9NY28 637 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 MAT2BQ9NZL9 334 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 EHD3Q9NZN3 535 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 CLCF1Q9UBD9 225 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 FETUBQ9UGM5 382 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 PYCARDQ9ULZ3 195 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 SAR1BQ9Y6B6 198 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 FBN3Q75N90 2809 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 SNPHO15079 494 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 UGT2B11O75310 529 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 SNX4O95219 450 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 IL2RAP01589 272 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 CPMP14384 443 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 PTX3P26022 381 aaPredicted RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 CNTFP26441 200 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 CCKARP32238 428 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 STARP49675 285 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 GFRA1P56159 465 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 GNG11P61952 73 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 DCAF7P61962 342 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 SORDQ00796 357 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 TECRLQ5HYJ1 363 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 TBCELQ5QJ74 424 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 OR52E8Q6IFG1 317 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 ANGPTL8Q6UXH0 198 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 C22orf34Q6ZV56 151 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 RAPH1Q70E73 1250 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 CAMKMTQ7Z624 323 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 NUDT13Q86X67 352 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 GCNT2Q8N0V5 402 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 TAGAPQ8N103 731 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 RHEBL1Q8TAI7 183 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 CDKL2Q92772 493 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 ABTB1Q969K4 478 aaPredicted RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 HSPBAP1Q96EW2 488 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 SECISBP2Q96T21 854 aaKnown RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 NAPGQ99747 312 aaPredicted RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 PELOQ9BRX2 385 aaKnown RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 IPPKQ9H8X2 491 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 SERHLQ9NQF3 203 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 MTRF1LQ9UGC7 380 aaKnown RBP12.16□□□□□ -0.46
DDX41-210ENST00000509576 ADGRE2Q9UHX3 823 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 ZNF225Q9UK10 706 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 MAPRE3Q9UPY8 281 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 PCDHGA11Q9Y5H2 935 aa12.16□□□□□ -0.46
DDX41-210ENST00000509576 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 FOXE1O00358 373 aaPredicted RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 TP53I11O14683 189 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 ICOSLGO75144 302 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 PPM1BO75688 479 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 TNFSF13O75888 250 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 TGM6O95932 706 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 IL18BPO95998 194 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 KLK1P06870 262 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 TMIGD3P0DMS9 266 aaPredicted RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 TLX1P31314 330 aaPredicted RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 MAGEA4P43358 317 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 MASP1P48740 699 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 LHX2P50458 406 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 XKP51811 444 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 ALDH18A1P54886 795 aaKnown RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 CLDN15P56746 228 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 GALNT1Q10472 559 aaPredicted RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 MROH9Q5TGP6 573 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 TMEM81Q6P7N7 255 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 CYP20A1Q6UW02 462 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 LUZP2Q86TE4 346 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 TBC1D1Q86TI0 1168 aaPredicted RBP12.15□□□□□ -0.46
DDX41-210ENST00000509576 PM20D2Q8IYS1 436 aa12.15□□□□□ -0.46
DDX41-210ENST00000509576 C17orf47Q8NEP4 570 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms