RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 ZNF382Q96SR6 550 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 NUDT22Q9BRQ3 303 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 EDEM2Q9BV94 578 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 HDHD5Q9BXW7 423 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 FBXW2Q9UKT8 454 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 KIR2DS5A0A0G2JLQ3 304 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 A0A0G2JNG1 304 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 LNP1A1A4G5 178 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 CENPBD1B2RD01 187 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 KIR2DS3K7RE56 304 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 RGS14O43566 566 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 OR2B3O76000 313 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 RASAL1O95294 804 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 YES1P07947 543 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 BMP2P12643 396 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 ZNF250P15622 560 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 ST6GAL1P15907 406 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 GADD45AP24522 165 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 GP2P55259 537 aaKnown RBP8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 GBX1Q14549 363 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 GRM7Q14831 915 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 KIR2DS5Q14953 304 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 C14orf28Q4W4Y0 310 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 RFTN2Q52LD8 501 aaPredicted RBP8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 PYDC2Q56P42 97 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 CACHD1Q5VU97 1274 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 ENPP6Q6UWR7 440 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 FAM131AQ6UXB0 335 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 ADGRG5Q8IZF4 528 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 PARP16Q8N5Y8 322 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 ANKFN1Q8N957 763 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 C1orf216Q8TAB5 229 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 APIPQ96GX9 242 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 CNPPD1Q9BV87 410 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 OR51E2Q9H255 320 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 KAT8Q9H7Z6 458 aaKnown RBP8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 LRTM1Q9HBL6 345 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 TAS2R16Q9NYV7 291 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 KLHL42Q9P2K6 505 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 VTI1BQ9UEU0 232 aa8.21□□□□□ -1.1
LIMCH1-209ENST00000509277 C4orf47A7E2U8 309 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 H0YC42 278 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 DLGAP1O14490 977 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CDC123O75794 336 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 KLK1P06870 262 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 EBLN1P0CF75 366 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 LBPP18428 481 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 IL1RNP18510 177 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 EPORP19235 508 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TEAD1P28347 426 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 SSR2P43308 183 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CDK10Q15131 360 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ZSWIM7Q19AV6 140 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 HKDC1Q2TB90 917 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CTU2Q2VPK5 515 aaKnown RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CDONQ4KMG0 1287 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ZMAT1Q5H9K5 638 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ZNF57Q68EA5 555 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 XAF1Q6GPH4 301 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ERICH5Q6P6B1 374 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 FIGLAQ6QHK4 219 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CFAP77Q6ZQR2 320 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 KCT2Q8NC54 265 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 OR2L3Q8NG85 312 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 OR2A1Q8NGT9 310 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 VANGL1Q8TAA9 524 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 SLC13A3Q8WWT9 602 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ZUFSPQ96AP4 578 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TPD52L3Q96J77 140 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 EGLN2Q96KS0 407 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 PPIL3Q9H2H8 161 aaKnown RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ADGRE2Q9UHX3 823 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CLEC4AQ9UMR7 237 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 DMXL1Q9Y485 3027 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 LOC100130705A0A1B0GUX0 176 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 C2orf74A8MZ97 194 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 DLL1O00548 723 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 UGT2B11O75310 529 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 PDE9AO76083 593 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 FCGR1AP12314 374 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 EPHA8P29322 1005 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 PKLRP30613 574 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 SLC6A12P48065 614 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 UFM1P61960 85 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 RUNX1T1Q06455 604 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TOP3AQ13472 1001 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 EFR3AQ14156 821 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 LIX1Q8N485 282 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 LSMEM1Q8N8F7 131 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 OR56A3Q8NH54 315 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 RHOXF1Q8NHV9 184 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 RERGQ96A58 199 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 COL26A1Q96A83 441 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 AGPAT4Q9NRZ5 378 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 HCN4Q9Y3Q4 1203 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 KIF26BQ2KJY2 2108 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TCRBV3S1A0A5B6 114 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms