RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DPM1O60762 260 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ULK1O75385 1050 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ITGA10O75578 1167 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ATP6AP2O75787 350 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 OR2J2O76002 312 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 LRATO95237 230 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ALPPP05187 535 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 FGF4P08620 206 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ALDOCP09972 364 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 SFTPCP11686 197 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 GPX3P22352 226 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 GNLYP22749 145 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 FEN1P39748 380 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 SOX3P41225 446 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 RNF4P78317 190 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 PLIN5Q00G26 463 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 OCRLQ01968 901 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF763Q0D2J5 394 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 FUT7Q11130 342 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 PTGR1Q14914 329 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 EXOSC7Q15024 291 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 OR1C1Q15619 314 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 PDCD2Q16342 344 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 NNATQ16517 81 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 SPIN4Q56A73 249 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 CFAP157Q5JU67 520 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 SPINK14Q6IE38 97 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 NOXRED1Q6NXP6 359 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 TMEM64Q6YI46 380 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 CISD2Q8N5K1 135 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 TEX19Q8NA77 164 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 MORN4Q8NDC4 146 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ADCY4Q8NFM4 1077 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 OR7G2Q8NG99 324 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 CPT1CQ8TCG5 803 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 GRHL3Q8TE85 626 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 HAS2Q92819 552 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ADIPOR1Q96A54 375 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 CIDECQ96AQ7 238 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 EXOSC8Q96B26 276 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 KLHL29Q96CT2 875 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 DGAT2Q96PD7 388 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 SLX1AQ9BQ83 275 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 TRMOQ9BU70 441 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 C1orf50Q9BV19 199 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ITPAQ9BY32 194 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 CENPHQ9H3R5 247 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 LRTM1Q9HBL6 345 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ERVK-11Q9UQG0 969 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 MRPS33Q9Y291 106 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 POLR3KQ9Y2Y1 108 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 TRAF6Q9Y4K3 522 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 POLEQ07864 2286 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 FBN2P35556 2912 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ADGRG4Q8IZF6 3080 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ELOA3CA0A087WX78 387 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 C1orf226A1L170 272 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 BLACEA4D250 179 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ASPDHA6ND91 283 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 LRRC3CA6NJW4 275 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ELOA3DA6NLF2 546 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CYSRT1A8MQ03 144 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 MYO1GB0I1T2 1018 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 G3V3Y1 287 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 H3BQF6 201 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 J3QKU1 62 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 WWP2O00308 870 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SDHDO14521 159 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ANKRD28O15084 1053 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 BIRC5O15392 142 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 NME2P1O60361 137 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 PRAMEF2O60811 474 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ERAL1O75616 437 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ZWINTO95229 277 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 IFNA16P05015 189 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ATP1B1P05026 303 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 TUBBP07437 444 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 MYZAPP0CAP1 466 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SLC35E2P0CK97 266 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CCL3P10147 92 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ESRRAP11474 423 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 BCKDHAP12694 445 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CD1EP15812 388 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 DDCP20711 480 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 EFNA1P20827 205 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 HPDP32754 393 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 RFC3P40938 356 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 BUD31P41223 144 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ZFP36L2P47974 494 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CDK9P50750 372 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ABCE1P61221 599 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 TRA2BP62995 288 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ARG2P78540 354 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 HSF1Q00613 529 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ACTN3Q08043 901 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ACSM2AQ08AH3 577 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 STX4Q12846 297 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SERTAD2Q14140 314 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 MEP1AQ16819 746 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms