RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SPATA18Q8TC71 538 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 GTSF1Q8WW33 167 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ZNF606Q8WXB4 792 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 FAM213AQ9BRX8 229 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 YTHDF1Q9BYJ9 559 aaKnown RBP3.62□□□□□ -1.83
DHFR-204ENST00000508282 DDX47Q9H0S4 455 aaKnown RBP3.62□□□□□ -1.83
DHFR-204ENST00000508282 NAPBQ9H115 298 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 NGBQ9NPG2 151 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 PLEK2Q9NYT0 353 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 Q9UF83 564 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 KCNN3Q9UGI6 736 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 OR1A2Q9Y585 309 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 FAM205AQ6ZU69 1335 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 KIAA1217Q5T5P2 1943 aa3.62□□□□□ -1.83
DHFR-204ENST00000508282 ZSCAN5CA6NGD5 496 aaPredicted RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 LRRTM2O43300 516 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 DUSP11O75319 330 aaKnown RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 AKR7A3O95154 331 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 ZNF19P17023 458 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 CCND2P30279 289 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 MAGEA4P43358 317 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 MAGEB1P43366 347 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 RPL27P61353 136 aaKnown RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 IGLV3-21P80748 117 aaPredicted RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 TSTA3Q13630 321 aaPredicted RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 DPYSQ14117 519 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 CRMP1Q14194 572 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 KARSQ15046 597 aaKnown RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 SPHARQ15513 63 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 TRADDQ15628 312 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 WDR25Q64LD2 544 aaPredicted RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 SNRNP48Q6IEG0 339 aaKnown RBP3.61□□□□□ -1.83
DHFR-204ENST00000508282 OR6B2Q6IFH4 312 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 FBXW8Q8N3Y1 598 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 BEST4Q8NFU0 473 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 PCED1BQ96HM7 432 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 CYYR1Q96J86 154 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 SAMD8Q96LT4 415 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 RAB40CQ96S21 281 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 ANP32EQ9BTT0 268 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 LRRC2Q9BYS8 371 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 DCAF16Q9NXF7 216 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 KCNK6Q9Y257 313 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 KIF3AQ9Y496 699 aa3.61□□□□□ -1.83
DHFR-204ENST00000508282 HAT1O14929 419 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 MCF2LO15068 1137 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 RHBDL1O75783 438 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 PTBP3O95758 552 aaKnown RBP3.6□□□□□ -1.83
DHFR-204ENST00000508282 PDGFBP01127 241 aaPredicted RBP3.6□□□□□ -1.83
DHFR-204ENST00000508282 CPA3P15088 417 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 ZNF18P17022 549 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 ACP1P24666 158 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 FASP25445 335 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 ADSSP30520 456 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 IFNAR2P48551 515 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 PPP1R8Q12972 351 aaKnown RBP3.6□□□□□ -1.83
DHFR-204ENST00000508282 ACKR1Q16570 336 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 RAET1GQ6H3X3 334 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 CGB2Q6NT52 195 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 WDR88Q6ZMY6 472 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 C1orf186Q6ZWK4 172 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 TAF8Q7Z7C8 310 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 TMEM110Q86TL2 294 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 TMEM126BQ8IUX1 230 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 WDR49Q8IV35 697 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 CCDC197Q8NCU1 140 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 OR1K1Q8NGR3 316 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 GANCQ8TET4 914 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 BADQ92934 168 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 MRPL24Q96A35 216 aaKnown RBP3.6□□□□□ -1.83
DHFR-204ENST00000508282 MRPL38Q96DV4 380 aaKnown RBP3.6□□□□□ -1.83
DHFR-204ENST00000508282 DTD2Q96FN9 168 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 PPP1R16AQ96I34 528 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 ZIM3Q96PE6 472 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 ACPTQ9BZG2 426 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 NT5C3AQ9H0P0 336 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 RAB17Q9H0T7 212 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 MAGEF1Q9HAY2 307 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 ZCCHC3Q9NUD5 404 aaKnown RBP3.6□□□□□ -1.83
DHFR-204ENST00000508282 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 RSPH14Q9UHP6 348 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 PSORS1C1Q9UIG5 152 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 DNPEPQ9ULA0 475 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 NUDCQ9Y266 331 aa3.6□□□□□ -1.83
DHFR-204ENST00000508282 TLR4O00206 839 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 CHUKO15111 745 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 KIAA0513O60268 411 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 TSC22D2O75157 780 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 DIRAS3O95661 229 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 TSPY4P0CV99 314 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 TSPY10P0CW01 314 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 KRT13P13646 458 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 GPX3P22352 226 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 HNRNPFP52597 415 aaKnown RBP3.59□□□□□ -1.83
DHFR-204ENST00000508282 SRP54P61011 504 aaKnown RBP3.59□□□□□ -1.83
DHFR-204ENST00000508282 SLC34A1Q06495 639 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 MEF2DQ14814 521 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 STXBP2Q15833 593 aa3.59□□□□□ -1.83
DHFR-204ENST00000508282 SLC25A24Q6NUK1 477 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms