RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 OPN3Q9H1Y3 402 aaPredicted RBP12.59□□□□□ -0.39
DDR1-260ENST00000507533 ZDHHC18Q9NUE0 388 aa12.59□□□□□ -0.39
DDR1-260ENST00000507533 PSD3Q9NYI0 1048 aa12.59□□□□□ -0.39
DDR1-260ENST00000507533 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
DDR1-260ENST00000507533 WWOXQ9NZC7 414 aa12.59□□□□□ -0.39
DDR1-260ENST00000507533 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.39
DDR1-260ENST00000507533 USF3Q68DE3 2245 aa12.58□□□□□ -0.39
DDR1-260ENST00000507533 C2orf92A0A1B0GVN3 265 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 LRRC14BA6NHZ5 514 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 RTCAO00442 366 aaKnown RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 PLOD2O00469 737 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 AHSGP02765 367 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 CRHP06850 196 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 KCNJ5P48544 419 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 STARP49675 285 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 TMED10P49755 219 aaKnown RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 SETDB1Q15047 1291 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 ETFDHQ16134 617 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 BEX5Q5H9J7 111 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 SH2D5Q6ZV89 423 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 P4HA3Q7Z4N8 544 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 CCDC25Q86WR0 208 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 CNTN4Q8IWV2 1026 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 ZNF611Q8N823 705 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 SRFBP1Q8NEF9 429 aaKnown RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 OR14L1PQ8NHC6 308 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 TP53INP1Q96A56 240 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 CTHRC1Q96CG8 243 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 RPF2Q9H7B2 306 aaKnown RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 SNX15Q9NRS6 342 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 MOCS1Q9NZB8 636 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 CDC42EP3Q9UKI2 254 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 ZNF490Q9ULM2 529 aaPredicted RBP12.58□□□□□ -0.4
DDR1-260ENST00000507533 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.4
DDR1-260ENST00000507533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 HS3ST1O14792 307 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 OR10H2O60403 315 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 PLAUP00749 431 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 CLPSP04118 112 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 GSTA2P09210 222 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 HIST1H1TP22492 207 aaPredicted RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 MAGEA4P43358 317 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 HNMTP50135 292 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 OCRLQ01968 901 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 RUNX1T1Q06455 604 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 MGAT5Q09328 741 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 SPRED3Q2MJR0 410 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 TEDDM1Q5T9Z0 273 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 HLA-DQA1Q5Y7H0 255 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 OR2A2Q6IF42 318 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 ST13P4Q8IZP2 240 aaPredicted RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 RDH11Q8TC12 318 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 IFT81Q8WYA0 676 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 TANKQ92844 425 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 RIT1Q92963 219 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 PDLIM5Q96HC4 596 aaKnown RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 METTL7AQ9H8H3 244 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 PRM3Q9NNZ6 103 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
DDR1-260ENST00000507533 ABCA1O95477 2261 aa12.57□□□□□ -0.4
DDR1-260ENST00000507533 C2orf72A6NCS6 295 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 NPEPPSL1A6NEC2 478 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 KLF4O43474 513 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 CDH16O75309 829 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 RHOXF2BP0C7M4 288 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 SSTR1P30872 391 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 SLC6A12P48065 614 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 LHX2P50458 406 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 NRG3P56975 720 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 SIRPAP78324 504 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 CDKL1Q00532 357 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 FUT7Q11130 342 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 SLAMF1Q13291 335 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 AP5B1Q2VPB7 878 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 CYS1Q717R9 158 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 GALNT7Q86SF2 657 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 IFT20Q8IY31 132 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 ANKRD7Q92527 254 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 CAVIN3Q969G5 261 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 VPS39Q96JC1 886 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 RHOXF2Q9BQY4 288 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 PELOQ9BRX2 385 aaKnown RBP12.56□□□□□ -0.4
DDR1-260ENST00000507533 KLHL4Q9C0H6 718 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 OR2B2Q9GZK3 357 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 SERHLQ9NQF3 203 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 RNF112Q9ULX5 631 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 DLGAP4Q9Y2H0 992 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 VWA7Q9Y334 891 aa12.56□□□□□ -0.4
DDR1-260ENST00000507533 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
DDR1-260ENST00000507533 CLGNO14967 610 aa12.55□□□□□ -0.4
DDR1-260ENST00000507533 HCRTR2O43614 444 aa12.55□□□□□ -0.4
DDR1-260ENST00000507533 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
DDR1-260ENST00000507533 SH3BGRLO75368 114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms