RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 DLGAP4Q9Y2H0 992 aa15.36■□□□□ 0.05
PDLIM7-215ENST00000506161 NPFFR2Q9Y5X5 522 aa15.36■□□□□ 0.05
PDLIM7-215ENST00000506161 HIVEP1P15822 2718 aa15.36■□□□□ 0.05
PDLIM7-215ENST00000506161 INTS1Q8N201 2190 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 ACOT7O00154 380 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 DYRK3O43781 588 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 ATP1B1P05026 303 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 AGAP20933 346 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 HMOX2P30519 316 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 PTGDSP41222 190 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 TRPC1P48995 793 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 SMSP52788 366 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 MAP4K2Q12851 820 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 LCP2Q13094 533 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 SLC22A9Q8IVM8 553 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 C4orf33Q8N1A6 199 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 LRRC25Q8N386 305 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 VWA5B2Q8N398 1253 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 CCNYL1Q8N7R7 359 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 ACBD4Q8NC06 268 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 SPPL2AQ8TCT8 520 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 C16orf78Q8WTQ4 265 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 KLHL29Q96CT2 875 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 TRIM44Q96DX7 344 aaPredicted RBP15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 PLLPQ9Y342 182 aa15.35■□□□□ 0.05
PDLIM7-215ENST00000506161 NKX2-6A6NCS4 301 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 B4DXG7 233 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 PCDH7O60245 1069 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 GLRA3O75311 464 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 ESRRBO95718 433 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 KRT6AP02538 564 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 KRT6BP04259 564 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 HSD3B1P14060 373 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 HSD3B2P26439 372 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 ABCD3P28288 659 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 PTGER4P35408 488 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 KRT6CP48668 564 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 EMDP50402 254 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 NAGLUP54802 743 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 KRTAP10-9P60411 292 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 KCNJ2P63252 427 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 TFF3Q07654 80 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 ZNF628Q5EBL2 1059 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 TDRPQ86YL5 185 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 CCDC116Q8IYX3 515 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 OR52R1Q8NGF1 315 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 KAT2AQ92830 837 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 HGDQ93099 445 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 TP53INP1Q96A56 240 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 NODALQ96S42 347 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 ZFP64Q9NPA5 681 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 NPDC1Q9NQX5 325 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.34■□□□□ 0.057e-8■■■■■ 55
PDLIM7-215ENST00000506161 EHD3Q9NZN3 535 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 DCDC2Q9UHG0 476 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 UTS2RQ9UKP6 389 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 CCL27Q9Y4X3 112 aa15.34■□□□□ 0.05
PDLIM7-215ENST00000506161 C2orf72A6NCS6 295 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 C17orf51A8MQB3 221 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 AQP7O14520 342 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 ULK1O75385 1050 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 ABCB1P08183 1280 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 MYL2P10916 166 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 TIA1P31483 386 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■□□□□ 11.1
PDLIM7-215ENST00000506161 ADH7P40394 386 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 PKNOX1P55347 436 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 WNT3P56703 355 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 VSNL1P62760 191 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 TRA2BP62995 288 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 SLC18A2Q05940 514 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 PMPCAQ10713 525 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 SLC10A1Q14973 349 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 PCLAFQ15004 111 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 RPS6KA2Q15349 733 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 ZNF585AQ6P3V2 769 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 RGS9BPQ6ZS82 235 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 FRMD7Q6ZUT3 714 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 SEM1Q6ZVN7 128 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 LIX1LQ8IVB5 337 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 EIF1ADQ8N9N8 165 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 C7orf57Q8NEG2 295 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 OR9A2Q8NGT5 310 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 DIO2Q92813 273 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 EXOSC8Q96B26 276 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 POM121Q96HA1 1249 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 JSRP1Q96MG2 331 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 RILPQ96NA2 401 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 TP63Q9H3D4 680 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 BCAP29Q9UHQ4 241 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 AKAP9Q99996 3911 aa15.33■□□□□ 0.04
PDLIM7-215ENST00000506161 DOCK7Q96N67 2140 aa15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 TRGV5A0A0B4J1U4 118 aa15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 SERTM1A2A2V5 107 aa15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 FAM90A27PA6NNH2 459 aa15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 ENO1P06733 434 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 GLI4P10075 376 aa15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 CSNK2A2P19784 350 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 CRHR1P34998 444 aa15.32■□□□□ 0.04
PDLIM7-215ENST00000506161 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms