RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ZNF19P17023 458 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 SAA4P35542 130 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 MDH2P40926 338 aaKnown RBP2.81□□□□□ -1.96
CHD1-203ENST00000505657 NLRP11P59045 1033 aaKnown RBP2.81□□□□□ -1.96
CHD1-203ENST00000505657 GALK2Q01415 458 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 ZNF85Q03923 595 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 PPP2R5CQ13362 524 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 ZKSCAN8Q15776 578 aaPredicted RBP2.81□□□□□ -1.96
CHD1-203ENST00000505657 FHL5Q5TD97 284 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 TAF3Q5VWG9 929 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 GCNT7Q6ZNI0 430 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 ASRGL1Q7L266 308 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 BNIPLQ7Z465 357 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 SNX21Q969T3 373 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 SLCO4A1Q96BD0 722 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 SPATA13Q96N96 652 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 FAM213AQ9BRX8 229 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 CARD9Q9H257 536 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 IKZF5Q9H5V7 419 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 NDUFA13Q9P0J0 144 aa2.81□□□□□ -1.96
CHD1-203ENST00000505657 MRPS2Q9Y399 296 aaKnown RBP2.81□□□□□ -1.96
CHD1-203ENST00000505657 CFAP65Q6ZU64 1925 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 IGHV3-35A0A0C4DH35 117 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 KLF18A0A0U1RQI7 1052 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 EEF2KO00418 725 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 CYB561D2O14569 222 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 VEGFDO43915 354 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 RANBP6O60518 1105 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 SERPINF2P08697 491 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 LAMP1P11279 417 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 AREGP15514 252 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 FERP16591 822 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 IDSP22304 550 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 GDF1P27539 372 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 IL2RGP31785 369 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 MAGEA9P43362 315 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 NSFP46459 744 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 CCL11P51671 97 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 CNN1P51911 297 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 SLC7A2P52569 658 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 VCPP55072 806 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 KRTAP10-8P60410 259 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 IGLV3-21P80748 117 aaPredicted RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 CDKL1Q00532 357 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 NPRL3Q12980 569 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 CD226Q15762 336 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 CLPPQ16740 277 aaPredicted RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 MS4A13Q5J8X5 152 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 OR4F17Q8NGA8 305 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 VN1R17PQ8TDU5 208 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 BADQ92934 168 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 CABS1Q96KC9 395 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 SIGLEC12Q96PQ1 595 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 OR4F4Q96R69 305 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 CCT8L2Q96SF2 557 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 CPXM1Q96SM3 734 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 FAM173AQ9BQD7 235 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 YTHDF1Q9BYJ9 559 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 NLNQ9BYT8 704 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 ABCG4Q9H172 646 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 TMEM245Q9H330 911 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 ESM1Q9NQ30 184 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 TIGARQ9NQ88 270 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 VPS54Q9P1Q0 977 aa2.8□□□□□ -1.96
CHD1-203ENST00000505657 PRRC2AP48634 2157 aaKnown RBP2.8□□□□□ -1.96
CHD1-203ENST00000505657 FRG2CA6NGY1 282 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 EFCAB7A8K855 629 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.79□□□□□ -1.96
CHD1-203ENST00000505657 NUDT14O95848 222 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 LY6G6DO95868 133 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ACP1P24666 158 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 NPY2RP49146 381 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 POU3F4P49335 361 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 MEOX2P50222 304 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ACTN3Q08043 901 aaPredicted RBP2.79□□□□□ -1.96
CHD1-203ENST00000505657 RPA4Q13156 261 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 MICAQ29983 383 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ZNF528Q3MIS6 628 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 CMPK2Q5EBM0 449 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 TOM1L2Q6ZVM7 507 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 KRTAP11-1Q8IUC1 163 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 MSANTD4Q8NCY6 345 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ZNF560Q96MR9 790 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 DEFB118Q96PH6 123 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 C19orf43Q9BQ61 176 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 PAXXQ9BUH6 204 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 MID1IP1Q9NPA3 183 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ZNF275Q9NSD4 429 aaPredicted RBP2.79□□□□□ -1.96
CHD1-203ENST00000505657 CENPMQ9NSP4 180 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 STARD5Q9NSY2 213 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 IMPAD1Q9NX62 359 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 RAI14Q9P0K7 980 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 ERVK-18Q9QC07 812 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 CIDEBQ9UHD4 219 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 CELA1Q9UNI1 258 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 RPH3AQ9Y2J0 694 aaPredicted RBP2.79□□□□□ -1.96
CHD1-203ENST00000505657 ZNF175Q9Y473 711 aa2.79□□□□□ -1.96
CHD1-203ENST00000505657 PTPRUQ92729 1446 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 MACROD2A1Z1Q3 448 aa2.78□□□□□ -1.96
CHD1-203ENST00000505657 TMEM89A2RUT3 159 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms