RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GPR20Q99678 358 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC30A3Q99726 388 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 YIPF4Q9BSR8 244 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 C1QTNF3Q9BXJ4 246 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TTTY10Q9BZA0 68 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZYG11BQ9C0D3 744 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 LHPPQ9H008 270 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SMURF2Q9HAU4 748 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 LRTM1Q9HBL6 345 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 BARX1Q9HBU1 254 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PNPLA8Q9NP80 782 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SPHK2Q9NRA0 654 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 IMP3Q9NV31 184 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 COMMD9Q9P000 198 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 IFT80Q9P2H3 777 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SEC14L3Q9UDX4 400 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZDHHC2Q9UIJ5 367 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PHF11Q9UIL8 331 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF281Q9Y2X9 895 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR10H1Q9Y4A9 318 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NID2Q14112 1375 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PRAMEF33A0A0G2JMD5 474 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A1W2PQH9 124 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 UBE2QL1A1L167 161 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 YJEFN3A6XGL0 299 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ARHGEF33A8MVX0 844 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM238C9JI98 176 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 I3L521 148 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PRMT5O14744 637 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 KCNAB3O43448 404 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PRAMEF10O60809 474 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF821O75541 412 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DIRAS3O95661 229 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 IGSF6O95976 241 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SFTPBP07988 381 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 GZMHP20718 246 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SERPINA4P29622 427 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MPIP34949 423 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 OR1D2P34982 312 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 CAPGP40121 348 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC1A3P43003 542 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 OMPP47874 163 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TTPAP49638 278 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PLA2G16P53816 162 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PSMD4P55036 377 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 LSM6P62312 80 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 HGFACQ04756 655 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 C2orf80Q0P641 193 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MERTKQ12866 999 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC10A2Q12908 348 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DUSP6Q16828 381 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC36A3Q495N2 470 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SYPL2Q5VXT5 272 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 C17orf107Q6ZR85 190 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 USP30Q70CQ3 517 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 HMGN2P46Q86SG4 172 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PIM3Q86V86 326 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 KMT5CQ86Y97 462 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF655Q8N720 491 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TNFAIP8L1Q8WVP5 186 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PSMG2Q969U7 264 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TMCO6Q96DC7 493 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 NXPE2Q96DL1 559 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DNAJA3Q96EY1 480 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 AURKBQ96GD4 344 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MRGPRX2Q96LB1 330 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 RSPO3Q9BXY4 272 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TRIM2Q9C040 744 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 POLR2J2Q9GZM3 115 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MCOLN1Q9GZU1 580 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 METTL9Q9H1A3 318 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SMOC2Q9H3U7 446 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF768Q9H5H4 540 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 EPHX3Q9H6B9 360 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PDLIM7Q9NR12 457 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ABCD2Q9UBJ2 740 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC2A6Q9UGQ3 507 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ST3GAL5Q9UNP4 418 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 RNF24Q9Y225 148 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 EP300Q09472 2414 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 LOC100509620A0A075B734 347 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A0A6YYC8 382 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SMIM28A0A1B0GU29 152 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 FABP12A6NFH5 140 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM210A6NLX4 147 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SPATA31C2B4DYI2 1134 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 I3L1I5 382 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DSCR3O14972 297 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MID1O15344 667 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 B4GAT1O43505 415 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 VPS4BO75351 444 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 STK16O75716 305 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 LATS1O95835 1130 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 TSPAN12O95859 305 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ALPPP05187 535 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ACSM4P0C7M7 580 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PDHA2P29803 388 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 ARRB2P32121 409 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 CCR7P32248 378 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms