RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 UAP1L1Q3KQV9 507 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 HECTD3Q5T447 861 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 AVPI1Q5T686 147 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 HIST2H3PS2Q5TEC6 136 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CDCP2Q5VXM1 449 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 OR7E24Q6IFN5 339 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 LINGO4Q6UY18 593 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ETV3LQ6ZN32 361 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RTL4Q6ZR62 310 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MON1AQ86VX9 555 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM132CQ8N3T6 1108 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SPATA6LQ8N4H0 392 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 COLGALT1Q8NBJ5 622 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 C2CD4AQ8NCU7 369 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 FBXW5Q969U6 566 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ORAI1Q96D31 301 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 HEXIM2Q96MH2 286 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CMTM3Q96MX0 182 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TSNAXQ99598 290 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CACNG6Q9BXT2 260 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 POLR2J2Q9GZM3 115 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 POLR2J3Q9H1A7 115 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 SLC25A51Q9H1U9 297 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 TFB2MQ9H5Q4 396 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CARS2Q9HA77 564 aaKnown RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 MCCC2Q9HCC0 563 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 RANGRFQ9HD47 186 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 ASB6Q9NWX5 421 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 CBLCQ9ULV8 474 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 POLR3HQ9Y535 204 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-204ENST00000503468 PCDHA9Q9Y5H5 950 aa2.64□□□□□ -1.99
NEDD4-204ENST00000503468 A0A0B4J203 849 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FAM95CA0A1B0GW59 222 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 C1orf226A1L170 272 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FMO6PO60774 539 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SERPINA3P01011 423 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SERPINA5P05154 406 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 HEXAP06865 529 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ACAA1P09110 424 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PRG2P13727 222 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PAICSP22234 425 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 THPOP40225 353 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RBM34P42696 430 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 BTN1A1Q13410 526 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM132DQ14C87 1099 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TRAM1Q15629 374 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 OCLNQ16625 522 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GUCA2BQ16661 112 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF699Q32M78 642 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FAM209BQ5JX69 171 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FAM69AQ5T7M9 428 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PVRIGQ6DKI7 326 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FIP1L1Q6UN15 594 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CFAP77Q6ZQR2 320 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NECAB2Q7Z6G3 386 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CMC1Q7Z7K0 106 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZBTB46Q86UZ6 589 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ZDHHC21Q8IVQ6 265 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM151BQ8IW70 566 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SLC30A8Q8IWU4 369 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 C9orf40Q8IXQ3 194 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 DNAJC22Q8N4W6 341 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PCSK9Q8NBP7 692 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 OR6M1Q8NGM8 313 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 OR52N1Q8NH53 320 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SPATA22Q8NHS9 363 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FAM216AQ8WUB2 273 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RXFP2Q8WXD0 754 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NR4A3Q92570 626 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NSMAFQ92636 917 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RRNAD1Q96FB5 475 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MRPL48Q96GC5 212 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CEP41Q9BYV8 373 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SLC6A16Q9GZN6 736 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CRISPLD1Q9H336 500 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FAM120CQ9NX05 1096 aaKnown RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CPNE7Q9UBL6 633 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TCFL5Q9UL49 500 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 EDARQ9UNE0 448 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 NINQ8N4C6 2090 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SPAG17Q6Q759 2223 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TRAV6A0A075B6T7 132 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 TEX13CA0A0J9YWL9 993 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 A8MU76 341 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 KIAA0513O60268 411 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 SDC3O75056 442 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 LRP3O75074 770 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ECI2O75521 394 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 RP2O75695 350 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GJB5O95377 273 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PAK4O96013 591 aaPredicted RBP2.63□□□□□ -1.99
NEDD4-204ENST00000503468 ERVK-10P10266 1014 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 CKBP12277 381 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 PNLIPP16233 465 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 UGT2B7P16662 529 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 FMO4P31512 558 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 GGT2P36268 569 aa2.63□□□□□ -1.99
NEDD4-204ENST00000503468 MAP2K6P52564 334 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms