RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TUBA3EQ6PEY2 450 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 LGI4Q8N135 537 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 ARMC10Q8N2F6 343 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 OR5L2Q8NGL0 311 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 NUBPLQ8TB37 319 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 HAS2Q92819 552 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 ZBED6CLQ96FA7 236 aaPredicted RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 SIGLEC12Q96PQ1 595 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 RASL10BQ96S79 203 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 PRPF18Q99633 342 aaKnown RBP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 DUSP26Q9BV47 211 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCLT1-205ENST00000503401 ABI3Q9P2A4 366 aa15.28■□□□□ 0.04
SCLT1-205ENST00000503401 C2orf92A0A1B0GVN3 265 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 OR5H15A6NDH6 313 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 OR6C76A6NM76 312 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 EMDP50402 254 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 KLRB1Q12918 225 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.03
SCLT1-205ENST00000503401 SPANXN4Q5MJ08 99 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 FHL5Q5TD97 284 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 SPINK14Q6IE38 97 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 CGB2Q6NT52 195 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF843Q8N446 348 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 TMEM156Q8N614 296 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 ZFP28Q8NHY6 868 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 ELP4Q96EB1 424 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 UTP23Q9BRU9 249 aaKnown RBP15.27■□□□□ 0.03
SCLT1-205ENST00000503401 ITPAQ9BY32 194 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 ACSS1Q9NUB1 689 aaPredicted RBP15.27■□□□□ 0.03
SCLT1-205ENST00000503401 ATAD3AQ9NVI7 634 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 B3GNT3Q9Y2A9 372 aa15.27■□□□□ 0.03
SCLT1-205ENST00000503401 YARS2Q9Y2Z4 477 aaKnown RBP15.27■□□□□ 0.03
SCLT1-205ENST00000503401 A0A1W2PRB8 838 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 UPK1AO00322 258 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 PLOD3O60568 738 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 PRAMEF2O60811 474 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 C6orf47O95873 294 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 IDO1P14902 403 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 GPX3P22352 226 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 SOX3P41225 446 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 TNFSF10P50591 281 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 SSR4P51571 173 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 NR0B1P51843 470 aaKnown RBP15.26■□□□□ 0.03
SCLT1-205ENST00000503401 PHC1P78364 1004 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 FAM174BQ3ZCQ3 159 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 TMEM64Q6YI46 380 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 Q6ZS92 163 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 CAMKMTQ7Z624 323 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 HPS6Q86YV9 775 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 OR9I1Q8NGQ6 314 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 ADIPOR1Q96A54 375 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 CCDC28BQ9BUN5 200 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 HES7Q9BYE0 225 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 BHLHE41Q9C0J9 482 aaPredicted RBP15.26■□□□□ 0.03
SCLT1-205ENST00000503401 RNF32Q9H0A6 362 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 CLMPQ9H6B4 373 aa15.26■□□□□ 0.03
SCLT1-205ENST00000503401 DDX18Q9NVP1 670 aaKnown RBP15.26■□□□□ 0.03
SCLT1-205ENST00000503401 OR6B1O95007 311 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ABCB1P08183 1280 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 DDX5P17844 614 aaKnown RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 CYB561P49447 251 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 DGKQP52824 942 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 CLNS1AP54105 237 aaKnown RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 WNT3P56703 355 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 OR1C1Q15619 314 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 GSTA3Q16772 222 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PDCD4Q53EL6 469 aaKnown RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 HLA-DQA1Q5Y7H0 255 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PAOXQ6QHF9 649 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 SZRD1Q7Z422 152 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 WDR53Q7Z5U6 358 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ANKRD46Q86W74 232 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 CLECL1Q8IZS7 167 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF441Q8N8Z8 693 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 Q8NA96 180 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ASB15Q8WXK1 588 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PNPLA2Q96AD5 504 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF317Q96PQ6 595 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 LRFN1Q9P244 771 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 HEMK1Q9Y5R4 338 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 SNX8Q9Y5X2 465 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 EXPH5Q8NEV8 1989 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PLOD2O00469 737 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 CFLARO15519 480 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 NEURL1O76050 574 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 NADKO95544 446 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-205ENST00000503401 CASRP41180 1078 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 KIR3DL1P43629 444 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 HLCSP50747 726 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PRKAG1P54619 331 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 TLR1Q15399 786 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 PIGGQ5H8A4 983 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 IL20RBQ6UXL0 311 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ZNF227Q86WZ6 799 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 OR2L13Q8N349 312 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 OR8J2Q8NGG1 315 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 TESCQ96BS2 214 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 ERP27Q96DN0 273 aa15.25■□□□□ 0.03
SCLT1-205ENST00000503401 RILPQ96NA2 401 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms