RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 C1orf21Q9H246 121 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 EPS8L2Q9H6S3 715 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19■□□□□ 0.63
CDC42SE2-206ENST00000503291 BCAP29Q9UHQ4 241 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 HNRNPCL1O60812 293 aaKnown RBP19■□□□□ 0.63
CDC42SE2-206ENST00000503291 NME6O75414 186 aaPredicted RBP19■□□□□ 0.63
CDC42SE2-206ENST00000503291 IGKV3-11P04433 115 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 COX6A1P12074 109 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 SLC6A2P23975 617 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 SAXO2Q658L1 398 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 BHLHB9Q6PI77 547 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 OR52R1Q8NGF1 315 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 SNIP1Q8TAD8 396 aaKnown RBP19■□□□□ 0.63
CDC42SE2-206ENST00000503291 PNPT1Q8TCS8 783 aaKnown RBP19■□□□□ 0.63
CDC42SE2-206ENST00000503291 ADAMTS17Q8TE56 1095 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 CCDC86Q9H6F5 360 aaKnown RBP19■□□□□ 0.63
CDC42SE2-206ENST00000503291 DKK4Q9UBT3 224 aa19■□□□□ 0.63
CDC42SE2-206ENST00000503291 FRYQ5TBA9 3013 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 A0A1W2PQ72 361 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 RASSF2P50749 326 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 GPR143P51810 404 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 PSME3P61289 254 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 RABL3Q5HYI8 236 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 ANGPTL8Q6UXH0 198 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 RAB43Q86YS6 212 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 PGAM4Q8N0Y7 254 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 ZNF615Q8N8J6 731 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 B3GNT7Q8NFL0 401 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 OR56A1Q8NGH5 318 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 OR1N1Q8NGS0 311 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 GATA6Q92908 595 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 NEURL3Q96EH8 262 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 ART5Q96L15 291 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 OR10A5Q9H207 317 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 IKZF5Q9H5V7 419 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 NDE1Q9NXR1 346 aa18.99■□□□□ 0.63
CDC42SE2-206ENST00000503291 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 KLK10O43240 276 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 BCAS2O75934 225 aaPredicted RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 HMGN2P05204 90 aaKnown RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 CASP9P55211 416 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 MTPNP58546 118 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 SLC26A5P58743 744 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 DUSP8Q13202 625 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 C16orf89Q6UX73 402 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 NDUFAF7Q7L592 441 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 DEFB107AQ8IZN7 70 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 OR7G1Q8NGA0 311 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 GIMAP5Q96F15 307 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 IMMP1LQ96LU5 166 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 CPPED1Q9BRF8 314 aaPredicted RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 THUMPD3Q9BV44 507 aaKnown RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 NUDT9Q9BW91 350 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 EQTNQ9NQ60 294 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 GPATCH2Q9NW75 528 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 P4HTMQ9NXG6 502 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 PPIEQ9UNP9 301 aaKnown RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 GMEB1Q9Y692 573 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 NSG1A0A0A6YYJ2 146 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 PSMG1O95456 288 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 KRT75O95678 551 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 CLPSP04118 112 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 SLC37A1P57057 533 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 SELPLGQ14242 412 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 LACTB2Q53H82 288 aaPredicted RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 YTHDF3Q7Z739 585 aaKnown RBP18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 MRGPREQ86SM8 312 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 RNF130Q86XS8 419 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 OR8J3Q8NGG0 315 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 NCLNQ969V3 563 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 BTBD10Q9BSF8 475 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 COPS7AQ9UBW8 275 aa18.98■□□□□ 0.63
CDC42SE2-206ENST00000503291 NCOR2Q9Y618 2525 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 EVPLLA8MZ36 301 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 GYG2O15488 501 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 WT1P19544 449 aaPredicted RBP18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 EMDP50402 254 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 RPS26P62854 115 aaKnown RBP18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 LASP1Q14847 261 aaKnown RBP18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 SLC15A3Q8IY34 581 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 APCDD1LQ8NCL9 501 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 C16orf58Q96GQ5 468 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 VPS50Q96JG6 964 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 MS4A4EQ96PG1 132 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 SH3GL1Q99961 368 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 DPH1Q9BZG8 443 aa18.97■□□□□ 0.63
CDC42SE2-206ENST00000503291 PRAMEF2O60811 474 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 COQ9O75208 318 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 PPIBP23284 216 aaKnown RBP18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 MVDP53602 400 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 VAC14Q08AM6 782 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 COX20Q5RI15 118 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 RNF111Q6ZNA4 994 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 C16orf52Q8NHV5 167 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 TMEM125Q96AQ2 219 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 YIPF4Q9BSR8 244 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 ZNF160Q9HCG1 818 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 FBXL4Q9UKA2 621 aa18.96■□□□□ 0.63
CDC42SE2-206ENST00000503291 C15orf38-AP3S2A0A0A6YYH1 394 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms