RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 TP53TG3Q9ULZ0 132 aa3.18□□□□□ -1.9
CDC42SE2-204ENST00000502639 TDRKHQ9Y2W6 561 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-204ENST00000502639 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 TRIM49BA6NDI0 452 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZSCAN5CA6NGD5 496 aaPredicted RBP3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CCT8L1PA6NM43 557 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 RANBP6O60518 1105 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 SYNGR4O95473 234 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 GOT2P00505 430 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 WNT2P09544 360 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 HSD17B1P14061 328 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CALML3P27482 149 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 MARCKSP29966 332 aaPredicted RBP3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 PPP2R1BP30154 601 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CHRNA3P32297 505 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 NOVP48745 357 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 VCPP55072 806 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 GSTO1P78417 241 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 NAAAQ02083 359 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZNF85Q03923 595 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZNF33BQ06732 778 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 TSTA3Q13630 321 aaPredicted RBP3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 TAF3Q5VWG9 929 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 HIST2H2AA3Q6FI13 130 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CGB2Q6NT52 195 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 BAIAP2L2Q6UXY1 529 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ASRGL1Q7L266 308 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 LUZP1Q86V48 1076 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZNF584Q8IVC4 421 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 PEX5LQ8IYB4 626 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CHCHD4Q8N4Q1 142 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CD177Q8N6Q3 437 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 BEST4Q8NFU0 473 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 PSMA8Q8TAA3 256 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 TBCKQ8TEA7 893 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 TMEM45BQ96B21 275 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 DEFB118Q96PH6 123 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 CUTCQ9NTM9 273 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ERVK-18Q9QC07 812 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 TRIM10Q9UDY6 481 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZNF175Q9Y473 711 aa3.17□□□□□ -1.9
CDC42SE2-204ENST00000502639 DDX39AO00148 427 aaKnown RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 CYB561D2O14569 222 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 IGKV3-15P01624 115 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 HIST1H2AGP0C0S8 130 aaPredicted RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 CYP11B1P15538 503 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 POU3F4P49335 361 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 ARHGDIAP52565 204 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 ARF5P84085 180 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 PAX2Q02962 417 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 CBX3Q13185 183 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 TGIF1Q15583 401 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZNF699Q32M78 642 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 HERC4Q5GLZ8 1057 aaPredicted RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 UTF1Q5T230 341 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 PLBD1Q6P4A8 553 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 PAMR1Q6UXH9 720 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 APOOLQ6UXV4 268 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 RABEPKQ7Z6M1 372 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 ADCK1Q86TW2 530 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 OR4F17Q8NGA8 305 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 URGCPQ8TCY9 931 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 HIST1H2ACQ93077 130 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 ZBED6CLQ96FA7 236 aaPredicted RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 OR4F4Q96R69 305 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 NAP1L3Q99457 506 aaPredicted RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 FAM173AQ9BQD7 235 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 TEX13AQ9BXU3 409 aaPredicted RBP3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 SIRPDQ9H106 197 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 SLITRK2Q9H156 845 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 LHX3Q9UBR4 397 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 MIOXQ9UGB7 285 aa3.16□□□□□ -1.9
CDC42SE2-204ENST00000502639 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ARPC1BO15143 372 aaKnown RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ADAM12O43184 909 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 RHBDL1O75783 438 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 BCAS2O75934 225 aaPredicted RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 APRTP07741 180 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 UMPSP11172 480 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ZNF18P17022 549 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 SGSHP51688 502 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 RAG2P55895 527 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 TRA2BP62995 288 aaKnown RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 PPP1R8Q12972 351 aaKnown RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 PPP1R3AQ16821 1122 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 MS4A13Q5J8X5 152 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 DDI2Q5TDH0 399 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 LIPKQ5VXJ0 399 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 ATRAIDQ6UW56 229 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 YRDCQ86U90 279 aaKnown RBP3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 AMZ2Q86W34 360 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 C11orf53Q8IXP5 236 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 GPD1LQ8N335 351 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 EXOC6Q8TAG9 804 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 TMEM37Q8WXS4 190 aa3.15□□□□□ -1.91
CDC42SE2-204ENST00000502639 EEF2KMTQ96G04 330 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms