RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 FBXO44Q9H4M3 255 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 AUNIPQ9H7T9 357 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 GEMIN7Q9H840 131 aaKnown RBP3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 Q9H8V8 135 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 ACOXLQ9NUZ1 547 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 LRWD1Q9UFC0 647 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 PADI3Q9ULW8 664 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 NME7Q9Y5B8 376 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 RNF215Q9Y6U7 377 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 VCANP13611 3396 aa3.97□□□□□ -1.77
HMGB1P21-201ENST00000502313 MUC3AQ02505 3323 aa3.96□□□□□ -1.77
HMGB1P21-201ENST00000502313 CDK5RAP2Q96SN8 1893 aa3.96□□□□□ -1.77
HMGB1P21-201ENST00000502313 A0A0D9SFI3 127 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TCRBV5S1A1TA0A578 114 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC22A23A1A5C7 686 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LRRC3CA6NJW4 275 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PCP4L1A6NKN8 68 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TCP10L2B9ZVM9 353 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF701M0R085 212 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PSMD11O00231 422 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CHUKO15111 745 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LSM1O15116 133 aaKnown RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 INPPL1O15357 1258 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCNN4O15554 427 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPINT2O43291 252 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TLX3O43711 291 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SNX3O60493 162 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 UPK3AO75631 287 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 NDUFB4O95168 129 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 BMP15O95972 392 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 NDUFB10O96000 172 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 STAG3L2P0CL84 134 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CPN1P15169 458 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRKACAP17612 351 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 DUTP33316 252 aaKnown RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 MPLP40238 635 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 BTDP43251 543 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 RPL21P46778 160 aaKnown RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 NOVP48745 357 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CSNK1EP49674 416 aaKnown RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LBX1P52954 281 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LIMK2P53671 638 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 MAP3K7CLP57077 242 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCNK10P57789 538 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SP3Q02447 781 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC3A1Q07837 685 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 FOXM1Q08050 763 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 GAGE2BQ13066 116 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF169Q14929 603 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CDSNQ15517 529 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 MAPK6Q16659 721 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CA9Q16790 459 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF829Q3KNS6 432 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 GAGE2EQ4V326 116 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ALG10Q5BKT4 473 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ALG10BQ5I7T1 473 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CAPN13Q6MZZ7 669 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 GAGE2AQ6NT46 116 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM71Q6P5X7 295 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TTC23LQ6PF05 361 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 C6orf89Q6UWU4 347 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 DBX2Q6ZNG2 339 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPRED1Q7Z699 444 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 AMIGO2Q86SJ2 522 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC22A16Q86VW1 577 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SFTPA2Q8IWL1 248 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 EFCAB13Q8IY85 973 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF683Q8IZ20 524 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC38A6Q8IZM9 456 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 RBFAQ8N0V3 343 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PNLDC1Q8NA58 520 aaKnown RBP3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ACVR1CQ8NER5 493 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR52I2Q8NH67 350 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCNG3Q8TAE7 436 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PIGCQ92535 297 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 SUSD6Q92537 303 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LPAR1Q92633 364 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 GLYATL1Q969I3 302 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM45BQ96B21 275 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 COQ8BQ96D53 544 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRRC1Q96M27 445 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 DEFB118Q96PH6 123 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 NDNQ99608 321 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 BTBD10Q9BSF8 475 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 HAUS8Q9BT25 410 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 GSDMCQ9BYG8 508 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 DNTTIP1Q9H147 329 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 RGCCQ9H4X1 137 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 CHRAC1Q9NRG0 131 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 NRBP2Q9NSY0 501 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PTTG3PQ9NZH4 202 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 C1RLQ9NZP8 487 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 GAGE2DQ9UEU5 116 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 UTS2RQ9UKP6 389 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 TBC1D24Q9ULP9 559 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 RHBDD3Q9Y3P4 386 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 LOXL2Q9Y4K0 774 aa3.96□□□□□ -1.78
HMGB1P21-201ENST00000502313 PDE4DIPQ5VU43 2346 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms