RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 EFHD1Q9BUP0 239 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 THUMPD3Q9BV44 507 aaKnown RBP5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 DUSP26Q9BV47 211 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 LRRC61Q9BV99 259 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 EBPLQ9BY08 206 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 ROGDIQ9GZN7 287 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 SPNS1Q9H2V7 528 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 TCEAL2Q9H3H9 227 aaPredicted RBP5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 REEP4Q9H6H4 257 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 ERVMER34-1Q9H9K5 563 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 NANOGQ9H9S0 305 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 UCK1Q9HA47 277 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 RNPEPL1Q9HAU8 725 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 SLC6A20Q9NP91 592 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 MYNNQ9NPC7 610 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 HRASLS2Q9NWW9 162 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 ACTR10Q9NZ32 417 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 STX18Q9P2W9 335 aaKnown RBP5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 ABCD2Q9UBJ2 740 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 CD300AQ9UGN4 299 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 ATP6V1HQ9UI12 483 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 PNMA8BQ9ULN7 279 aaPredicted RBP5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 LRRC42Q9Y546 428 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 PCDHA9Q9Y5H5 950 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 AP1M2Q9Y6Q5 423 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 FLNCQ14315 2725 aa5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 PCDH15Q96QU1 1955 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 LRP4O75096 1905 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PLXND1Q9Y4D7 1925 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PRAMEF33A0A0G2JMD5 474 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 A0A0J9YY10 115 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 A0A1B0GTW7 788 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 ASPDHA6ND91 283 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 LRIT2A6NDA9 550 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 GABRR3A8MPY1 467 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 B4DGG1 531 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 LMO7DNF2Z398 122 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 H0Y3Z8 333 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 SAP18O00422 153 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 NME4O00746 187 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PLPP1O14494 284 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 RFXANKO14593 260 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 HAT1O14929 419 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 SCAMP2O15127 329 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 GSTA4O15217 222 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 NVLO15381 856 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 YY2O15391 372 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 TNFSF14O43557 240 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 TBX19O60806 448 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 CPSF4O95639 269 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 BAG2O95816 211 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 SCG5P05408 212 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 RPSAP08865 295 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 SLC35G6P0C7Q6 338 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 UGT2B7P16662 529 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 FAHP16930 419 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 TCN1P20061 433 aaPredicted RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 ZNF10P21506 573 aaPredicted RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 HTR1EP28566 365 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PEBP1P30086 187 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 BSGP35613 385 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 RPS19P39019 145 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 GRIA3P42263 894 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 DPP6P42658 865 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 FASLGP48023 281 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PPM1FP49593 454 aaPredicted RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 CSNK1EP49674 416 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 MAPK12P53778 367 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 RRADP55042 308 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 TAS2R50P59544 299 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 CYP4F2P78329 520 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 LIPEQ05469 1076 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 SLC34A1Q06495 639 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 DUSP8Q13202 625 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 CAPRIN1Q14444 709 aaKnown RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 RCN1Q15293 331 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 UGT8Q16880 541 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 DUOXA1Q1HG43 343 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 HKDC1Q2TB90 917 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 RUNDC3AQ59EK9 446 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 ZMAT1Q5H9K5 638 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 MANEAQ5SRI9 462 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 CHCHD2P9Q5T1J5 151 aaPredicted RBP5□□□□□ -1.61
HMGXB4-208ENST00000498325 LRIF1Q5T3J3 769 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 LYSMD4Q5XG99 296 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 OR4F3Q6IEY1 312 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM71E1Q6IPT2 247 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 ADNP2Q6IQ32 1131 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 ZNF425Q6IV72 752 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 TRIM40Q6P9F5 258 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 FIGLAQ6QHK4 219 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 SPESP1Q6UW49 350 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 DLEU7Q6UYE1 221 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 CAMKMTQ7Z624 323 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 ASPGQ86U10 573 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 SPATA24Q86W54 205 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PAQR7Q86WK9 346 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 PLD3Q8IV08 490 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 ARL14Q8N4G2 192 aa5□□□□□ -1.61
HMGXB4-208ENST00000498325 TRIML2Q8N7C3 387 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms