RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	PLOD3	O60568	738 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	SNRPB2	P08579	225 aa	Known RBP	13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	HOXB9	P17482	250 aa	Predicted RBP	13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	EMD	P50402	254 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	CASP9	P55211	416 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	MSRB3	Q8IXL7	192 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	OR2L13	Q8N349	312 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	C16orf52	Q8NHV5	167 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	PSMF1	Q92530	271 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	OTUB1	Q96FW1	271 aa	Predicted RBP	13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	IP6K3	Q96PC2	410 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	LRRC37B	Q96QE4	947 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	NPAS2	Q99743	824 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	PAIP1	Q9H074	479 aa	Known RBP	13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	ING2	Q9H160	280 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	ARL8B	Q9NVJ2	186 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	MAP10	Q9P2G4	905 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	BCAP29	Q9UHQ4	241 aa		13.8	□□□□□ -0.2
UMPS-209	ENST00000497791	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	TMEM200C	A6NKL6	621 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	DCTN3	O75935	186 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	PSMG1	O95456	288 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	DDX5	P17844	614 aa	Known RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SOAT1	P35610	550 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	PRKAG1	P54619	331 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	FOXK2	Q01167	660 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	MAPKAPK3	Q16644	382 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	C6orf10	Q5SRN2	563 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	REP15	Q6BDI9	236 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	RNF111	Q6ZNA4	994 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SZRD1	Q7Z422	152 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SIRT6	Q8N6T7	355 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	M1AP	Q8TC57	530 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	BRIX1	Q8TDN6	353 aa	Known RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	GIMAP5	Q96F15	307 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	VMP1	Q96GC9	406 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	AURKB	Q96GD4	344 aa	Predicted RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	C16orf58	Q96GQ5	468 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	THOC3	Q96J01	351 aa	Known RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	PANX1	Q96RD7	426 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	IL1RL2	Q9HB29	575 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	MMP25	Q9NPA2	562 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	EQTN	Q9NQ60	294 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	TMEM45A	Q9NWC5	275 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SLC25A37	Q9NYZ2	338 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SYNDIG1L	A6NDD5	238 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SERPINA7	P05543	415 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	COX4I1	P13073	169 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	ADSL	P30566	484 aa	Predicted RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	RPS26	P62854	115 aa	Known RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	EXT1	Q16394	746 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	C6orf163	Q5TEZ5	329 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	C19orf48	Q6RUI8	117 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	DLEU7	Q6UYE1	221 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	MSANTD1	Q6ZTZ1	278 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	KBTBD2	Q8IY47	623 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	NATD1	Q8N6N6	113 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	VPS37A	Q8NEZ2	397 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	NUP43	Q8NFH3	380 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	FBXO30	Q8TB52	745 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	RCN3	Q96D15	328 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	ITCH	Q96J02	903 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	FER1L6-AS2	Q96M78	137 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	YIPF4	Q9BSR8	244 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	ITPA	Q9BY32	194 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	TRIM8	Q9BZR9	551 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SERHL2	Q9H4I8	314 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	NEUROD4	Q9HD90	331 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	ATP13A2	Q9NQ11	1180 aa		13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	DDX18	Q9NVP1	670 aa	Known RBP	13.79	□□□□□ -0.2
UMPS-209	ENST00000497791	SPTA1	P02549	2419 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791		A0A087WV62	115 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	RNF103-CHMP3	A0A140T963	221 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791		A8MUI8	341 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	RFXANK	O14593	260 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	SLC22A2	O15244	555 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	DYRK3	O43781	588 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	ZNF354A	O60765	605 aa	Predicted RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	ITGA3	P26006	1051 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	CPA2	P48052	419 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	CCT3	P49368	545 aa	Known RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	CCL11	P51671	97 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	RNF4	P78317	190 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	AIMP2	Q13155	320 aa	Known RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	CYLC2	Q14093	348 aa	Predicted RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	EBP	Q15125	230 aa	Known RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	NNAT	Q16517	81 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	ZNF621	Q6ZSS3	439 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	GALNT16	Q8N428	558 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	CLEC1A	Q8NC01	280 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	PNPT1	Q8TCS8	783 aa	Known RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	EXTL1	Q92935	676 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	SLC25A23	Q9BV35	468 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	EPS8L2	Q9H6S3	715 aa		13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.78	□□□□□ -0.2
UMPS-209	ENST00000497791	GPATCH2	Q9NW75	528 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms