RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FAHD1Q6P587 224 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 TMEM107Q6UX40 140 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 DEF8Q6ZN54 512 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 KCTD8Q6ZWB6 473 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 RRM2BQ7LG56 351 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 ZNF438Q7Z4V0 828 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 UBE3DQ7Z6J8 389 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 CLVS1Q8IUQ0 354 aaPredicted RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 HS3ST5Q8IZT8 346 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 GALNT15Q8N3T1 639 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CAMKK1Q8N5S9 505 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CSNK1A1LQ8N752 337 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 C19orf47Q8N9M1 422 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 FAM46DQ8NEK8 389 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CADM4Q8NFZ8 388 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 OR10Q1Q8NGQ4 319 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CCL4L1Q8NHW4 92 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 MIPOL1Q8TD10 442 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 UTP15Q8TED0 518 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 SLC37A2Q8TED4 501 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 SLC38A5Q8WUX1 472 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 NCSTNQ92542 709 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 TANKQ92844 425 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 NMD3Q96D46 503 aaKnown RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 MPP4Q96JB8 637 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 C7orf34Q96L11 122 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 COL21A1Q96P44 957 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 NODALQ96S42 347 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 SLC38A3Q99624 504 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 PITX2Q99697 317 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 BCL7BQ9BQE9 202 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 PINK1Q9BXM7 581 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 ACTRT3Q9BYD9 372 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 TPSD1Q9BZJ3 242 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 SEMA6CQ9H3T2 930 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 KLHL31Q9H511 634 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 UCK1Q9HA47 277 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 BCL2L10Q9HD36 194 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 CD93Q9NPY3 652 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 LHX9Q9NQ69 397 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 GPR27Q9NS67 375 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 IRAK4Q9NWZ3 460 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 NDUFAF4Q9P032 175 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 C5AR2Q9P296 337 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 WNT16Q9UBV4 365 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 EPHA6Q9UF33 1036 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 MGAT4BQ9UQ53 548 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 IFT52Q9Y366 437 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 KMT2BQ9UMN6 2715 aaPredicted RBP6.52□□□□□ -1.37
USP39-219ENST00000496047 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
USP39-219ENST00000496047 MYOCOSA0A1B0GUC4 107 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 A0A1W2PR48 441 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TRIM64A6NGJ6 449 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 METTL12A8MUP2 240 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 SYT5O00445 386 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 AP3D1O14617 1153 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 RGS10O43665 173 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 KLHL18O94889 574 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 MFN2O95140 757 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CPNE6O95741 557 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TBX6O95947 436 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 STATHP02808 62 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CSF2P04141 144 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 EIF2S1P05198 315 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 HMGN2P05204 90 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 ALOX5P09917 674 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TFPTP0C1Z6 253 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CYP4B1P13584 511 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PORP16435 677 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 IL7RP16871 459 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 JUNBP17275 347 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 CD247P20963 164 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 GSTM3P21266 225 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CD72P21854 359 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PRKACGP22612 351 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CRHBPP24387 322 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 GGT2P36268 569 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 FEN1P39748 380 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 KCNJ5P48544 419 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CDH15P55291 814 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 RPS26P62854 115 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 RPL6Q02878 288 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.51□□□□□ -1.37
USP39-219ENST00000496047 CD47Q08722 323 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PPP1R8Q12972 351 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 EIF2B5Q13144 721 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 RAPSNQ13702 412 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 SIM2Q14190 667 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 FZD2Q14332 565 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 LARS2Q15031 903 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 ZNHIT3Q15649 155 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 EXOC3L2Q2M3D2 409 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 LEXMQ3ZCV2 418 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 DEFB134Q4QY38 66 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 RPS26P11Q5JNZ5 115 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 WDR45BQ5MNZ6 344 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 FOXB2Q5VYV0 432 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CDC73Q6P1J9 531 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 ZCCHC12Q6PEW1 402 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms