RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SPOPO43791 374 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 DNAJA2O60884 412 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 NIPSNAP2O75323 286 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 TUSC2O75896 110 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 SNX4O95219 450 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 APOC2P02655 101 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 FESP07332 822 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 PEX2P28328 305 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 SIRPAP78324 504 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 PLIN5Q00G26 463 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 STX4Q12846 297 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 FGFBP1Q14512 234 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 ACSBG2Q5FVE4 666 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 YRDCQ86U90 279 aaKnown RBP8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 KLHDC8BQ8IXV7 354 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 MPP5Q8N3R9 675 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 BANPQ8N9N5 519 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAM47BQ8NA70 645 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAM83FQ8NEG4 500 aaPredicted RBP8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 RAB3IL1Q8TBN0 382 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 PTPMT1Q8WUK0 201 aaPredicted RBP8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 ARL8AQ96BM9 186 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 RSRC1Q96IZ7 334 aaKnown RBP8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 RILPQ96NA2 401 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 TACO1Q9BSH4 297 aaKnown RBP8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 NSMCE4AQ9NXX6 385 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 CLDN16Q9Y5I7 305 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 hCG_1818297A0A087WSY0 165 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 A0A0A6YYJ9 748 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TRBC2A0A5B9 178 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 E5RI56 91 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 SLCO1B7G3V0H7 640 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 H3BMM5 538 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 PLOD2O00469 737 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TP53I11O14683 189 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TMPRSS2O15393 492 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CD3EAPO15446 510 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZBTB14O43829 449 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 BAG2O95816 211 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 SERPING1P05155 500 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CD3EP07766 207 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 DHRS4L1P0CG22 281 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CCDC166P0CW27 439 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TNFSF4P23510 183 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 PTPN6P29350 595 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CCR8P51685 355 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 UBE2HP62256 183 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 MYL5Q02045 173 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 GUCY1A3Q02108 690 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 EXOC3L2Q2M3D2 409 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CR1LQ2VPA4 569 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TTLL9Q3SXZ7 439 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CTSL3PQ5NE16 218 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 PGBD2Q6P3X8 592 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CHMP1BQ7LBR1 199 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 APTXQ7Z2E3 356 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 KIAA1328Q86T90 577 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 LINC00523Q86TU6 105 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 LCA5Q86VQ0 697 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 GPSM1Q86YR5 675 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 CILP2Q8IUL8 1156 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 PCYOX1LQ8NBM8 494 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAM168AQ92567 244 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 PROX1Q92786 737 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 C1GALT1C1Q96EU7 318 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 C11orf24Q96F05 449 aaPredicted RBP8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAR2Q96K12 515 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 GAL3ST4Q96RP7 486 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 DNAJC11Q9NVH1 559 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAIMQ9NVQ4 179 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 WHRNQ9P202 907 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 MARCH4Q9P2E8 410 aaPredicted RBP8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZFP69BQ9UJL9 534 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 AMFRQ9UKV5 643 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 RIMKLBQ9ULI2 386 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 PROCRQ9UNN8 238 aa8.65□□□□□ -1.02
SMARCAL1-213ENST00000496037 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 SMTNL1A8MU46 457 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 EIF3FO00303 357 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 TBX1O43435 398 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 DYRK3O43781 588 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 TIPRLO75663 272 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 ZNF189O75820 626 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 VENTXO95231 258 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 TGM6O95932 706 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 CSTBP04080 98 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 CD8BP10966 210 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 COX7A2P14406 83 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 SAT1P21673 171 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 FMO4P31512 558 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 GALNSP34059 522 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 SKIV2L2P42285 1042 aaKnown RBP8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 SLC1A1P43005 524 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 PRIM2P49643 509 aa8.64□□□□□ -1.03
SMARCAL1-213ENST00000496037 HNRNPFP52597 415 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms