RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PGRP06401 933 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 MC3RP41968 323 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 DCAF7P61962 342 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 ARG2P78540 354 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 PRR5P85299 388 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 EXOSC7Q15024 291 aaKnown RBP15.87■□□□□ 0.13
HDAC6-235ENST00000495515 EBPQ15125 230 aaKnown RBP15.87■□□□□ 0.13
HDAC6-235ENST00000495515 SPANXN4Q5MJ08 99 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 FCRLBQ6BAA4 426 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 OR4F3Q6IEY1 312 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 CGB2Q6NT52 195 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 C9orf40Q8IXQ3 194 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 OR7G2Q8NG99 324 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 C16orf52Q8NHV5 167 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 SLC22A8Q8TCC7 542 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 TP53INP1Q96A56 240 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 GAL3ST4Q96RP7 486 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 UTP23Q9BRU9 249 aaKnown RBP15.87■□□□□ 0.13
HDAC6-235ENST00000495515 WWTR1Q9GZV5 400 aa15.87■□□□□ 0.13
HDAC6-235ENST00000495515 ZNF71Q9NQZ8 489 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-235ENST00000495515 C19orf53Q9UNZ5 99 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-235ENST00000495515 COPG1Q9Y678 874 aaKnown RBP15.87■□□□□ 0.13
HDAC6-235ENST00000495515 ITPR1Q14643 2758 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 FAM234BA2RU67 622 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 PRKNO60260 465 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-235ENST00000495515 ITGA10O75578 1167 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 CLPSP04118 112 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 GPX3P22352 226 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 SSR4P51571 173 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 POLR2JP52435 117 aaKnown RBP15.86■□□□□ 0.13
HDAC6-235ENST00000495515 SEC24CP53992 1094 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 LY6DQ14210 128 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 BHLHB9Q6PI77 547 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 PAOXQ6QHF9 649 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 TAGAPQ8N103 731 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 BEST3Q8N1M1 668 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 OR2L13Q8N349 312 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 TMEM156Q8N614 296 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 SLC15A4Q8N697 577 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 HORMAD2Q8N7B1 307 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 C17orf47Q8NEP4 570 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 NUDT8Q8WV74 236 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 HAS2Q92819 552 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 MOAP1Q96BY2 351 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 MAGED4Q96JG8 741 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 TEX37Q96LM6 180 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 OR52E6Q96RD3 313 aa15.86■□□□□ 0.13
HDAC6-235ENST00000495515 TTC36A6NLP5 189 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 WWP2O00308 870 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 UPK1AO00322 258 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 EMC8O43402 210 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 C6orf47O95873 294 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 EFNA1P20827 205 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-235ENST00000495515 IL12AP29459 219 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 EMDP50402 254 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 CDK9P50750 372 aaKnown RBP15.85■□□□□ 0.13
HDAC6-235ENST00000495515 WNT3P56703 355 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 NRG3P56975 720 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 KCNK10P57789 538 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 PSPHP78330 225 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 OC90Q02509 493 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-235ENST00000495515 ZNHIT3Q15649 155 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-235ENST00000495515 SPDYE7PQ495Y7 208 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 SOWAHCQ53LP3 525 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-235ENST00000495515 FHL5Q5TD97 284 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 OPN5Q6U736 354 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 PCSK4Q6UW60 755 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 TMEM64Q6YI46 380 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 MSANTD1Q6ZTZ1 278 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 SZRD1Q7Z422 152 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 SPATA21Q7Z572 469 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 GPALPP1Q8IXQ4 340 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 PSMA8Q8TAA3 256 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 NPAS2Q99743 824 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 FAM107BQ9H098 131 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 RMND5AQ9H871 391 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 BTNL2Q9UIR0 455 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 HEMK1Q9Y5R4 338 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-235ENST00000495515 SNX8Q9Y5X2 465 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 MED13Q9UHV7 2174 aa15.85■□□□□ 0.13
HDAC6-235ENST00000495515 OR5H15A6NDH6 313 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 TMEM200CA6NKL6 621 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 OR2J2O76002 312 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 WDPCPO95876 746 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 PDGFAP04085 211 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 ABCB1P08183 1280 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 TRHRP34981 398 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 SOX18P35713 384 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 PPICP45877 212 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 CYB561P49447 251 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 DGKQP52824 942 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 SF3A3Q12874 501 aaKnown RBP eCLIP15.84■□□□□ 0.133e-8■■■■■ 29.7
HDAC6-235ENST00000495515 ZNF155Q12901 538 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 PIGGQ5H8A4 983 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 DND1Q8IYX4 353 aaKnown RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 TRIML2Q8N7C3 387 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 TEX19Q8NA77 164 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 NUP43Q8NFH3 380 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 OR56A1Q8NGH5 318 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 OR4A15Q8NGL6 344 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms