RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FHL5Q5TD97 284 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 PRAMEF8Q5VWM4 474 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 PRAMEF7Q5VXH5 474 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 MFSD12Q6NUT3 480 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 RBM45Q8IUH3 476 aaKnown RBP15.5■□□□□ 0.07
ATG4B-225ENST00000494465 LACC1Q8IV20 430 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 SLC5A8Q8N695 610 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 RASSF5Q8WWW0 418 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 MS4A4EQ96PG1 132 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 DDX18Q9NVP1 670 aaKnown RBP15.5■□□□□ 0.07
ATG4B-225ENST00000494465 RNF215Q9Y6U7 377 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 SPACA6W5XKT8 324 aa15.5■□□□□ 0.07
ATG4B-225ENST00000494465 ARID1BQ8NFD5 2236 aaPredicted RBP15.5■□□□□ 0.07
ATG4B-225ENST00000494465 CACNA1EQ15878 2313 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 IGHV5-51A0A0C4DH38 117 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 A0A1B0GVT2 93 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 PCDH17O14917 1159 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 UGT2B11O75310 529 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 GPR75O95800 540 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 ATP1B1P05026 303 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HLCSP50747 726 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 IL1RL1Q01638 556 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 KEAP1Q14145 624 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 SLC25A45Q8N413 288 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 TTC29Q8NA56 475 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 OR10G2Q8NGC3 310 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 SLC35A4Q96G79 324 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 TGM7Q96PF1 710 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 IER2Q9BTL4 223 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 BTBD2Q9BX70 525 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 GABARAPL3Q9BY60 117 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 SLC38A1Q9H2H9 487 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 ANKHQ9HCJ1 492 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 NDUFA13Q9P0J0 144 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 RHCGQ9UBD6 479 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 NDRG4Q9ULP0 352 aaKnown RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 FAM32AQ9Y421 112 aaKnown RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 MUC3AQ02505 3323 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 DSPPQ9NZW4 1301 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 CABIN1Q9Y6J0 2220 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 TNRC6BQ9UPQ9 1833 aaKnown RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 A0A0G2JPF8 293 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HNRNPCL2B2RXH8 293 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HNRNPCL3B7ZW38 293 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 FOXS1O43638 330 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 ZIC2O95409 532 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 GIMD1P0DJR0 217 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HNRNPCL4P0DMR1 293 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 RAB38P57729 211 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 TRMT12Q53H54 448 aaKnown RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 C6orf141Q5SZD1 244 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 NKAIN2Q5VXU1 208 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HEPHL1Q6MZM0 1159 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HMGN2P46Q86SG4 172 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 KRT73Q86Y46 540 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 SLC16A11Q8NCK7 471 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 HDAC2Q92769 488 aaKnown RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 ANKRD9Q96BM1 317 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-225ENST00000494465 PSD2Q9BQI7 771 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 RAB33BQ9H082 229 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 GIN1Q9NXP7 522 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 PTGFRNQ9P2B2 879 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 EPHA6Q9UF33 1036 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 ASXL3Q9C0F0 2248 aa15.49■□□□□ 0.07
ATG4B-225ENST00000494465 TLCD2A6NGC4 264 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 A8MVJ9 347 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 GADD45GO95257 159 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 PDGFBP01127 241 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CRHBPP24387 322 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 EPHA4P54764 986 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 BNIP3Q12983 259 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 GNA13Q14344 377 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 GPAT3Q53EU6 434 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CWF19L1Q69YN2 538 aaKnown RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CDC73Q6P1J9 531 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CCDC71Q8IV32 467 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 OR9Q2Q8NGE9 314 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 TANKQ92844 425 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 TMIGD2Q96BF3 282 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 DHRS1Q96LJ7 313 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 YIPF3Q9GZM5 350 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 QRSL1Q9H0R6 528 aaKnown RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 ERVMER34-1Q9H9K5 563 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 DNAAF2Q9NVR5 837 aaKnown RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 ACAD8Q9UKU7 415 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 A0A0A6YYC8 382 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 I3L1I5 382 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CHST10O43529 356 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CDH2P19022 906 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 AGXTP21549 392 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 HOXA6P31267 233 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 TPD52P55327 224 aaPredicted RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 BNC1Q01954 994 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CHRNEQ04844 493 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 MGAT2Q10469 447 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 NPRL3Q12980 569 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 SHBQ15464 509 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 CNPY1Q3B7I2 92 aa15.48■□□□□ 0.07
ATG4B-225ENST00000494465 EXOSC6Q5RKV6 272 aaKnown RBP15.48■□□□□ 0.07
ATG4B-225ENST00000494465 RBM48Q5RL73 367 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms