RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 EPHA3P29320 983 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 SOX3P41225 446 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 MEOX1P50221 254 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 IRX1P78414 480 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 KLF10Q13118 480 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 MPEG1Q2M385 716 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 BNC2Q6ZN30 1099 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 C16orf47Q6ZP98 133 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 Q6ZPB1 254 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 DGAT2L6Q6ZPD8 337 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 COMMD6Q7Z4G1 85 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 MDGA2Q7Z553 956 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 SULF2Q8IWU5 870 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 HOMEZQ8IX15 550 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 C9orf40Q8IXQ3 194 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 GHDCQ8N2G8 530 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 ZFP62Q8NB50 900 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 CEP70Q8NHQ1 597 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 C16orf52Q8NHV5 167 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 TRPC4APQ8TEL6 797 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 SELENOMQ8WWX9 145 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 SENP5Q96HI0 755 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 MAGED4Q96JG8 741 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 MRPL1Q9BYD6 325 aaKnown RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 WDR55Q9H6Y2 383 aaPredicted RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 LIN28AQ9H9Z2 209 aaKnown RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 TNFRSF12AQ9NP84 129 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 FARSBQ9NSD9 589 aaKnown RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 ERVK-11Q9UQG0 969 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 ZNF835Q9Y2P0 537 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 TRGV8A0A0C4DH27 118 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 ARHGAP10A1A4S6 786 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 GLOD5A6NK44 160 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 NPIPA5E9PKD4 350 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 AZIN1O14977 448 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 GYG2O15488 501 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 ASNA1O43681 348 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 PEX1O43933 1283 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 OR10H2O60403 315 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 WISP2O76076 250 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 KRT6AP02538 564 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 KRT6BP04259 564 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 KLK1P06870 262 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 SLC35E2P0CK97 266 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-209ENST00000494464 KRT6CP48668 564 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 CASP6P55212 293 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 PKNOX1P55347 436 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 TBL3Q12788 808 aaKnown RBP12.2□□□□□ -0.46
ERCC3-209ENST00000494464 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
ERCC3-209ENST00000494464 UGT3A2Q3SY77 523 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 CCNYL2Q5T2Q4 361 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 NDUFAF5Q5TEU4 345 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 FBXW10Q5XX13 1052 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 MTFR2Q6P444 385 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 OPN5Q6U736 354 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 RTL4Q6ZR62 310 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 RINLQ6ZS11 566 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 GPRIN3Q6ZVF9 776 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 ARHGAP24Q8N264 748 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 CDYL2Q8N8U2 506 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 PPWD1Q96BP3 646 aaKnown RBP12.2□□□□□ -0.46
ERCC3-209ENST00000494464 SGCZQ96LD1 299 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 TSPAN10Q9H1Z9 355 aaPredicted RBP12.2□□□□□ -0.46
ERCC3-209ENST00000494464 MID1IP1Q9NPA3 183 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 NMRK1Q9NWW6 199 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 TAS2R1Q9NYW7 299 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 SUCOQ9UBS9 1254 aaKnown RBP12.2□□□□□ -0.46
ERCC3-209ENST00000494464 NPIPA1Q9UND3 350 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
ERCC3-209ENST00000494464 DIDO1Q9BTC0 2240 aaKnown RBP12.19□□□□□ -0.46
ERCC3-209ENST00000494464 C1orf226A1L170 272 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 OR6C76A6NM76 312 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 HRKO00198 91 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 MANBAO00462 879 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 TFECO14948 347 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-209ENST00000494464 ZNF354AO60765 605 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-209ENST00000494464 ZG16O60844 167 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 GUCY1B2O75343 617 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
ERCC3-209ENST00000494464 ESRRBO95718 433 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 PIK3R1P27986 724 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 ATP4BP51164 291 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 MAPK12P53778 367 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 ERVK-8P63133 956 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 SGO1Q5FBB7 561 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 IL20RBQ6UXL0 311 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 RNF111Q6ZNA4 994 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 SLC29A4Q7RTT9 530 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 SPPL2CQ8IUH8 684 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 CHERPQ8IWX8 916 aaKnown RBP12.19□□□□□ -0.46
ERCC3-209ENST00000494464 SLC15A4Q8N697 577 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 SLC22A8Q8TCC7 542 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 RIT1Q92963 219 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 CCT7Q99832 543 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 CNPPD1Q9BV87 410 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 CADM1Q9BY67 442 aaKnown RBP12.19□□□□□ -0.46
ERCC3-209ENST00000494464 DEPPQ9NTK1 212 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms