RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 EML4Q9HC35 981 aaKnown RBP8.12□□□□□ -1.11
ITGB1-217ENST00000494395 C1orf109Q9NX04 203 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 ANKRD10Q9NXR5 420 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 TAS2R7Q9NYW3 318 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 MAT2BQ9NZL9 334 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 EHD3Q9NZN3 535 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 ABI3Q9P2A4 366 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 MYOTQ9UBF9 498 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 YARS2Q9Y2Z4 477 aaKnown RBP8.12□□□□□ -1.11
ITGB1-217ENST00000494395 FIS1Q9Y3D6 152 aa8.12□□□□□ -1.11
ITGB1-217ENST00000494395 POLR3HQ9Y535 204 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-217ENST00000494395 UBR5O95071 2799 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 GCN1Q92616 2671 aaKnown RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ZGRF1Q86YA3 2104 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 GNG14A0A1W2PPG7 69 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 WDR91A4D1P6 747 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ASPDHA6ND91 283 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 GOLGA6L10A6NI86 522 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 OR6C76A6NM76 312 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 TMEM114B3SHH9 223 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 TCP11X1B4DZS4 312 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SHISA8B8ZZ34 492 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 RGS14O43566 566 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 OR10H2O60403 315 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 OR2J2O76002 312 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 JUNP05412 331 aaKnown RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SP1P08047 785 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SDC1P18827 310 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 TNNI3P19429 210 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 DDCP20711 480 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SSTR4P31391 388 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 PTGER1P34995 402 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 FEN1P39748 380 aaKnown RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SSR4P51571 173 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 TDGF1P3P51864 188 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ABCE1P61221 599 aaKnown RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF267Q14586 743 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 HEPACAMQ14CZ8 416 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 LTB4RQ15722 352 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 MPEG1Q2M385 716 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 RFTN2Q52LD8 501 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 PIGGQ5H8A4 983 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF766Q5HY98 468 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 AGBL2Q5U5Z8 902 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SPINK14Q6IE38 97 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 FAM180BQ6P0A1 224 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 FAM111BQ6SJ93 734 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 AGR3Q8TD06 166 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF675Q8TD23 568 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 FAR1Q8WVX9 515 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 RIT1Q92963 219 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ARL8AQ96BM9 186 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 KLHL29Q96CT2 875 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF764Q96H86 408 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 RHOVQ96L33 236 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 CCT7Q99832 543 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SH3GL2Q99962 352 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 SLX1AQ9BQ83 275 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 CNPPD1Q9BV87 410 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 WWTR1Q9GZV5 400 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 STMN4Q9H169 189 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 LRTM1Q9HBL6 345 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 KCNK9Q9NPC2 374 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 LRFN1Q9P244 771 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 COPS7AQ9UBW8 275 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 UTS2RQ9UKP6 389 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 WBP11Q9Y2W2 641 aaKnown RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 COPG1Q9Y678 874 aaKnown RBP8.11□□□□□ -1.11
ITGB1-217ENST00000494395 ESPL1Q14674 2120 aa8.11□□□□□ -1.11
ITGB1-217ENST00000494395 TENM4Q6N022 2769 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SVILO95425 2214 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 MYO1GB0I1T2 1018 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 WWP2O00308 870 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 DYRK3O43781 588 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 NME2P1O60361 137 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 TBX19O60806 448 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SEC22BO75396 215 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ERAL1O75616 437 aaKnown RBP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SLC25A12O75746 678 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 WISP2O76076 250 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 OR6B1O95007 311 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 CBX6O95503 412 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 CBX7O95931 251 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 CHEK2O96017 543 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 CSNK2A2P19784 350 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 BGNP21810 368 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 NME2P22392 152 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 GRK2P25098 689 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SOX3P41225 446 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 UQCRFS1P47985 274 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SLC1A6P48664 564 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ALDH9A1P49189 494 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 CYB561P49447 251 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 RPL38P63173 70 aaKnown RBP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 PMP22Q01453 160 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SRSF1Q07955 248 aaKnown RBP eCLIP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 PDE7AQ13946 482 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms