RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SLC25A25Q6KCM7 469 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 RPUSD3Q6P087 351 aaKnown RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 IL20RBQ6UXL0 311 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ZNF551Q7Z340 670 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 CISD2Q8N5K1 135 aaKnown RBP12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 HORMAD2Q8N7B1 307 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ASB15Q8WXK1 588 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ADIPOR1Q96A54 375 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 COQ8BQ96D53 544 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 ERP27Q96DN0 273 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 SCMH1Q96GD3 660 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 HES7Q9BYE0 225 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 CFL2Q9Y281 166 aa12.53□□□□□ -0.4
COL1A1-208ENST00000494334 A0A087WV62 115 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 A8MVJ9 347 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 ANKRD28O15084 1053 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 NME6O75414 186 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 SLITRK5O94991 958 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 CD46P15529 392 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 DDX5P17844 614 aaKnown RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 MC3RP41968 323 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 NR0B1P51843 470 aaKnown RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 TLE1Q04724 770 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 INPP5JQ15735 1006 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 CPTPQ5TA50 214 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 HLA-DQA1Q5Y7H0 255 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 EPGNQ6UW88 154 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 TMEM107Q6UX40 140 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 SPATA19Q7Z5L4 167 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 CYP4Z2PQ8N1L4 340 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 SLC15A4Q8N697 577 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 CEP70Q8NHQ1 597 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 SLC22A8Q8TCC7 542 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 CPT1CQ8TCG5 803 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 ACTRT2Q8TDY3 377 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 SNRNP40Q96DI7 357 aaKnown RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 ELP4Q96EB1 424 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 ZBED6CLQ96FA7 236 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 OR52B2Q96RD2 323 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 PRPF18Q99633 342 aaKnown RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 ITPAQ9BY32 194 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 DPY30Q9C005 99 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 KLHL1Q9NR64 748 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 ACSS1Q9NUB1 689 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-208ENST00000494334 AIG1Q9NVV5 245 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 HPF1Q9NWY4 346 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 PRODH2Q9UF12 536 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 PCDHGB6Q9Y5F9 930 aa12.52□□□□□ -0.41
COL1A1-208ENST00000494334 UPK1AO00322 258 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 DIAPH2O60879 1101 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 SLC25A12O75746 678 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 TGDSO95455 350 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 SP1P08047 785 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 EFNA1P20827 205 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 CDK9P50750 372 aaKnown RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 HSPB3Q12988 150 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 MLC1Q15049 377 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 MAPKAPK3Q16644 382 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 LSM12Q3MHD2 195 aaKnown RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 OPN5Q6U736 354 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 GALNTL5Q7Z4T8 443 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 MDGA2Q7Z553 956 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 CAMKMTQ7Z624 323 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 GPALPP1Q8IXQ4 340 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 TAGAPQ8N103 731 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 OR2L13Q8N349 312 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 ZFP28Q8NHY6 868 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 MAGED4Q96JG8 741 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 C5orf34Q96MH7 638 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 DUSP26Q9BV47 211 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 BHLHE41Q9C0J9 482 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 NXF5Q9H1B4 397 aaKnown RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 ATAD3AQ9NVI7 634 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 C19orf53Q9UNZ5 99 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 MAPRE3Q9UPY8 281 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 ERVK-11Q9UQG0 969 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 NTNG1Q9Y2I2 539 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 GPR45Q9Y5Y3 372 aa12.51□□□□□ -0.41
COL1A1-208ENST00000494334 COPG1Q9Y678 874 aaKnown RBP12.51□□□□□ -0.41
COL1A1-208ENST00000494334 CROCCQ5TZA2 2017 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 A0A1W2PRB8 838 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 TCP11X1B4DZS4 312 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 EDF1O60869 148 aaKnown RBP12.5□□□□□ -0.41
COL1A1-208ENST00000494334 RASAL1O95294 804 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 PSMG1O95456 288 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 IFI6P09912 130 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 GPC1P35052 558 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 PPICP45877 212 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 IDH3AP50213 366 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 AQP5P55064 265 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 NME5P56597 212 aa12.5□□□□□ -0.41
COL1A1-208ENST00000494334 UFM1P61960 85 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms