RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SLC22A16Q86VW1 577 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 TICAM1Q8IUC6 712 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 SIAH3Q8IW03 269 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 FAM9CQ8IZT9 166 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 KIRREL3Q8IZU9 778 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 GHDCQ8N2G8 530 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF441Q8N8Z8 693 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 FAM13CQ8NE31 585 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 OR2M7Q8NG81 312 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 OR52R1Q8NGF1 315 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 OR6Y1Q8NGX8 325 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 OR2T11Q8NH01 316 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 C16orf52Q8NHV5 167 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.44□□□□□ -1.389e-7■■■■□ 25.1
TOP3A-207ENST00000493648 AGR3Q8TD06 166 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF675Q8TD23 568 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 TWIST2Q8WVJ9 160 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 RELTQ969Z4 430 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 ADIPOR1Q96A54 375 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 ZBTB9Q96C00 473 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 CTHRC1Q96CG8 243 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 HSPBAP1Q96EW2 488 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 MAGED4Q96JG8 741 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 PAIP2Q9BPZ3 127 aaKnown RBP6.44□□□□□ -1.38
TOP3A-207ENST00000493648 TSPAN10Q9H1Z9 355 aaPredicted RBP6.44□□□□□ -1.38
TOP3A-207ENST00000493648 TUBB1Q9H4B7 451 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 IL1RL2Q9HB29 575 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 ZDHHC2Q9UIJ5 367 aa6.44□□□□□ -1.38
TOP3A-207ENST00000493648 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.44□□□□□ -1.38
TOP3A-207ENST00000493648 UBR5O95071 2799 aaPredicted RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 TENM4Q6N022 2769 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PRRC2CQ9Y520 2896 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ANKRD33BA6NCL7 494 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 WIPF3A6NGB9 483 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 TMEM233B4DJY2 109 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 G3V3Y1 287 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 CCL21O00585 134 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PIP5K1BO14986 540 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 LSM1O15116 133 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ACOX3O15254 700 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 HS6ST1O60243 411 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 CDC40O60508 579 aaKnown RBP eCLIP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PLOD3O60568 738 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SLC19A2O60779 497 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PEX11AO75192 247 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SLITRK5O94991 958 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SNX4O95219 450 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 CBX7O95931 251 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 JUNP05412 331 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 DHRS4L1P0CG22 281 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 CCL3P10147 92 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ESRRAP11474 423 aaPredicted RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ABOP16442 354 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PCSK2P16519 638 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 GPX3P22352 226 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 NTSP30990 170 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 KRT20P35900 424 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 RFC3P40938 356 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PPICP45877 212 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ASMTP46597 345 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SLC1A6P48664 564 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 NCBP2P52298 156 aaKnown RBP eCLIP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ABCE1P61221 599 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 RPL38P63173 70 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 KCNJ2P63252 427 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PSPHP78330 225 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 MRPS35P82673 323 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 DUSP2Q05923 314 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 STX3Q13277 289 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SLC10A1Q14973 349 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 LTB4RQ15722 352 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 NTRK2Q16620 822 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 RFTN2Q52LD8 501 aaPredicted RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF628Q5EBL2 1059 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 TBCELQ5QJ74 424 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 C1QL3Q5VWW1 255 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 TMEM198Q66K66 360 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 LYPD8Q6UX82 237 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 NUP54Q7Z3B4 507 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 R3HCC1LQ7Z5L2 792 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 FJX1Q86VR8 437 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SPPL2CQ8IUH8 684 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 OR10G3Q8NGC4 313 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 OR5M3Q8NGP4 307 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 OR9A2Q8NGT5 310 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PAQR8Q8TEZ7 354 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 DIO2Q92813 273 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 KAT2AQ92830 837 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PPCDCQ96CD2 204 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 TUBGCP3Q96CW5 907 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 MTERF3Q96E29 417 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 LCORQ96JN0 433 aaPredicted RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PKNOX2Q96KN3 472 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PSMG3-AS1Q96PY0 264 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SECISBP2Q96T21 854 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ITPAQ9BY32 194 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 DEFB127Q9H1M4 99 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 REEP4Q9H6H4 257 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 DEPPQ9NTK1 212 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 TAS2R9Q9NYW1 312 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms