RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ZNF540Q8NDQ6 660 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 TRIM58Q8NG06 486 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 OR1J4Q8NGS1 313 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 NUBPLQ8TB37 319 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 CALML6Q8TD86 181 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
SEC13-219ENST00000492602 GRK7Q8WTQ7 553 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 PYCR2Q96C36 320 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 TRIM54Q9BYV2 358 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 OR10A4Q9H209 315 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 C12orf49Q9H741 205 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 CLK4Q9HAZ1 481 aaKnown RBP4.79□□□□□ -1.64
SEC13-219ENST00000492602 PLSCR4Q9NRQ2 329 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 SYBUQ9NX95 663 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 WHRNQ9P202 907 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 MARCH4Q9P2E8 410 aaPredicted RBP4.79□□□□□ -1.64
SEC13-219ENST00000492602 POU2F3Q9UKI9 436 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 REXO2Q9Y3B8 237 aaKnown RBP4.79□□□□□ -1.64
SEC13-219ENST00000492602 FKBP7Q9Y680 259 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 MAD1L1Q9Y6D9 718 aa4.79□□□□□ -1.64
SEC13-219ENST00000492602 NOTCH3Q9UM47 2321 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SDR42E2A6NKP2 422 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 E7EQL1 145 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 NPIPA7E9PJI5 369 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 G3V4G9 280 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ABCD4O14678 606 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 OR1F1O43749 312 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 LIASO43766 372 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ETHE1O95571 254 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 GOT2P00505 430 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 CATP04040 527 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 ALDOAP04075 364 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 NPIPA8P0DM63 369 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ETS1P14921 441 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ZNF708P17019 499 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 PSMB1P20618 241 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 HIST1H2ADP20671 130 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 MDKP21741 143 aaPredicted RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 ADH6P28332 368 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SKIV2L2P42285 1042 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 FABP6P51161 128 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 CHN2P52757 468 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 GFRA1P56159 465 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 FBXW4P57775 412 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 PHC1P78364 1004 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 CRADDP78560 199 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 BASP1P80723 227 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 COL10A1Q03692 680 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 RGS1Q08116 209 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 STX4Q12846 297 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ILF2Q12905 390 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 GPS1Q13098 491 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SNX1Q13596 522 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 PWP1Q13610 501 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 RPS6KA2Q15349 733 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 TSC22D1Q15714 1073 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 BEAN1Q3B7T3 259 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ANGPTL8Q6UXH0 198 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 TMEM64Q6YI46 380 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ZNF793Q6ZN11 406 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 C17orf107Q6ZR85 190 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 BEND4Q6ZU67 534 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 CCDC25Q86WR0 208 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 RELL1Q8IUW5 271 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 C9orf40Q8IXQ3 194 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 KLHDC8BQ8IXV7 354 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 BPIFB2Q8N4F0 458 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 LRRC57Q8N9N7 239 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 FAM47BQ8NA70 645 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SPC24Q8NBT2 197 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 STEAP2Q8NFT2 490 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 OR52K1Q8NGK4 314 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 OR13J1Q8NGT2 312 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 FNDC9Q8TBE3 224 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 PIWIL2Q8TC59 973 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 SPPL2AQ8TCT8 520 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ZNF721Q8TF20 911 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 ATG4AQ8WYN0 398 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 TAF15Q92804 592 aaKnown RBP eCLIP4.78□□□□□ -1.64
SEC13-219ENST00000492602 HPS1Q92902 700 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 FAM136AQ96C01 138 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 NXNL1Q96CM4 212 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 RBMXL1Q96E39 390 aaKnown RBP4.78□□□□□ -1.64
SEC13-219ENST00000492602 TMEM41AQ96HV5 264 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 HES6Q96HZ4 224 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SFXN2Q96NB2 322 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 DUX5Q96PT3 197 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 SNX18Q96RF0 628 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 GAL3ST4Q96RP7 486 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 DHRS9Q9BPW9 319 aa4.78□□□□□ -1.64
SEC13-219ENST00000492602 RBM4BQ9BQ04 359 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms