RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 EMX1Q04741 257 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 RAPSNQ13702 412 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SCARB2Q14108 478 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 GNA13Q14344 377 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SLBPQ14493 270 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 STARD3Q14849 445 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 MAD2L1BPQ15013 274 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 IGFBP7Q16270 282 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 MICAQ29983 383 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 CCDC157Q569K6 752 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TOR1AIP1Q5JTV8 583 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 PRAMEF14Q5SWL7 426 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 C9orf64Q5T6V5 341 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 DEPDC1Q5TB30 811 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 FHL5Q5TD97 284 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 HES3Q5TGS1 186 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 C1QL3Q5VWW1 255 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 REEP3Q6NUK4 255 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TUBA3EQ6PEY2 450 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 KLHL35Q6PF15 583 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TMIGD1Q6UXZ0 262 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 CCDC81Q6ZN84 652 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 MAMDC2Q7Z304 686 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 COMMD6Q7Z4G1 85 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TMEM179BQ7Z7N9 219 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TMPRSS11BQ86T26 416 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 LRRTM4Q86VH4 590 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 AMZ2Q86W34 360 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TRAPPC5Q8IUR0 188 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 DCUN1D3Q8IWE4 304 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 ETFBKMTQ8IXQ9 262 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 LRRC56Q8IYG6 542 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SLC34A3Q8N130 599 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 NAGSQ8N159 534 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 PARP8Q8N3A8 854 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF540Q8NDQ6 660 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 RHOXF1Q8NHV9 184 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 CDC26Q8NHZ8 85 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SPPL2AQ8TCT8 520 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 UBASH3BQ8TF42 649 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 GEMIN6Q8WXD5 167 aaKnown RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SMPDL3AQ92484 453 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 NR4A3Q92570 626 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TFGQ92734 400 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 RGMAQ96B86 450 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TPD52L3Q96J77 140 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 PLEKHA8Q96JA3 519 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 Q96MT0 163 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TEFMQ96QE5 360 aaKnown RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF300Q96RE9 604 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF607Q96SK3 696 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 MAPKAP1Q9BPZ7 522 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SLC35A5Q9BS91 424 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 DCUN1D5Q9BTE7 237 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 FUNDC2Q9BWH2 189 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 RAB11FIP5Q9BXF6 653 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 GABARAPL3Q9BY60 117 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 RACGAP1Q9H0H5 632 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SLC25A18Q9H1K4 315 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 OR2AG1Q9H205 316 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 CHST8Q9H2A9 424 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 SOX17Q9H6I2 414 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 GAREM1Q9H706 876 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 RMI1Q9H9A7 625 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 LIN28AQ9H9Z2 209 aaKnown RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 WASH6PQ9NQA3 447 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 MIEF1Q9NQG6 463 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 DMRT3Q9NQL9 472 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 C1GALT1Q9NS00 363 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 FAIMQ9NVQ4 179 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 GALNT8Q9NY28 637 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 GULP1Q9UBP9 304 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TMCC3Q9ULS5 477 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 MAGED1Q9Y5V3 778 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 A3GALT2U3KPV4 340 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 CSMD2Q7Z408 3487 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 ARHGEF17Q96PE2 2063 aaPredicted RBP4.79□□□□□ -1.64
PTPRK-213ENST00000490332 PCM1Q15154 2024 aa4.79□□□□□ -1.64
PTPRK-213ENST00000490332 TBC1D3BA6NDS4 549 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 EFCAB10A6NFE3 127 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 TMEM202A6NGA9 273 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 hCG_2039718K7EN88 272 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 MITFO75030 526 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-213ENST00000490332 CNOT3O75175 753 aaKnown RBP4.78□□□□□ -1.64
PTPRK-213ENST00000490332 RFPL3O75679 317 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 CCNB2O95067 398 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 GABARAPO95166 117 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 IFNW1P05000 195 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 F13BP05160 661 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 INHBBP09529 407 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 ALOX5P09917 674 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 ERGP11308 486 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 FOSL1P15407 271 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 IL7RP16871 459 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 DDCP20711 480 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 ACVR2AP27037 513 aa4.78□□□□□ -1.64
PTPRK-213ENST00000490332 RPL10P27635 214 aaKnown RBP4.78□□□□□ -1.64
PTPRK-213ENST00000490332 POLR2IP36954 125 aaKnown RBP4.78□□□□□ -1.64
PTPRK-213ENST00000490332 PIGAP37287 484 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms